SomamiR DB 2.0
Somatic mutations altering microRNA-ceRNA interactions
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PolymiRTS Database

Prediction criteria: TargetScan sites only     All 6mer or longer seed matches

Transcript ID: hsa_circ_0045544
Gene Symbol: RPL38
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Somatic mutations that impact miRNA target sites



Mutation Mutation ID Sample Name Cancer Type
chr17:g.74209295A>G COSM4722620 T3658 [large_intestine][colon][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-1288-3p ctgaaGCAGTCCctg UGGACUGC m7b Disrupted HHRBL_6691_BCBL1-2of3-SCL_841
hsa-miR-3199 ctgaagCAGTCCCTg AGGGACUG m8a Disrupted HHRBL_6691_BCBL1-2of3-SCL_841
hsa-miR-3977 cTGAAGCAgtccctg GUGCUUCA m7b Disrupted HHRBL_6691_BCBL1-2of3-SCL_841
hsa-miR-8052 ctgaagCAGTCCCtg CGGGACUG m7b Disrupted HHRBL_6691_BCBL1-2of3-SCL_841
Mutation Mutation ID Sample Name Cancer Type
chr17:g.74209231C>T COSM983944 TCGA-AP-A0LM-01 [endometrium][NS][carcinoma][endometrioid_carcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
No TargetScan sites are altered. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.


Mutation Mutation ID Sample Name Cancer Type
chr17:g.74209216G>A COSM4069270 TCGA-HU-A4GQ-01 [stomach][NS][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-6516-3p ggacaACATGAagtt AUCAUGUA m6b Created HHFCT_69067_cluster-9812_3_43
hsa-miR-6516-3p ggacaACATGAagtt AUCAUGUA m6b Created HHKTB_2247_NM_000999|203|242|39.3664895865276|120.73541084589
hsa-miR-6516-3p ggacaACATGAagtt AUCAUGUA m6b Created HHRBL_6691_BCBL1-2of3-SCL_841

Mutation Mutation ID Sample Name Cancer Type
chr17:g.74209209G>A COSM1385726 TCGA-D5-6928-01 [large_intestine][colon][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-2355-3p aaaataAGGACAAcg AUUGUCCU m7b Disrupted HHFCT_69067_cluster-9812_3_43
hsa-miR-511-5p aaaatAAAGACAacg GUGUCUUU m7b Created HHFCT_69067_cluster-9812_3_43
hsa-miR-676-3p aaaataAGGACAacg CUGUCCUA m6b Disrupted HHFCT_69067_cluster-9812_3_43
hsa-miR-6830-3p aaaatAAAGACAacg UGUCUUUC m7a Created HHFCT_69067_cluster-9812_3_43
hsa-miR-2355-3p aaaataAGGACAAcg AUUGUCCU m7b Disrupted HHKTB_2247_NM_000999|203|242|39.3664895865276|120.73541084589
hsa-miR-511-5p aaaatAAAGACAacg GUGUCUUU m7b Created HHKTB_2247_NM_000999|203|242|39.3664895865276|120.73541084589
hsa-miR-676-3p aaaataAGGACAacg CUGUCCUA m6b Disrupted HHKTB_2247_NM_000999|203|242|39.3664895865276|120.73541084589
hsa-miR-6830-3p aaaatAAAGACAacg UGUCUUUC m7a Created HHKTB_2247_NM_000999|203|242|39.3664895865276|120.73541084589
hsa-miR-2355-3p aaaataAGGACAAcg AUUGUCCU m7b Disrupted HHRBL_6691_BCBL1-2of3-SCL_841
hsa-miR-511-5p aaaatAAAGACAacg GUGUCUUU m7b Created HHRBL_6691_BCBL1-2of3-SCL_841
hsa-miR-676-3p aaaataAGGACAacg CUGUCCUA m6b Disrupted HHRBL_6691_BCBL1-2of3-SCL_841
hsa-miR-6830-3p aaaatAAAGACAacg UGUCUUUC m7a Created HHRBL_6691_BCBL1-2of3-SCL_841

*By default, only target sites identified by TargetScan are displayed. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.

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