SomamiR DB 2.0
Somatic mutations altering microRNA-ceRNA interactions
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PolymiRTS Database
Prediction criteria: TargetScan sites only     All 6mer or longer seed matches
Transcript ID: hsa_circ_0015963
Gene Symbol: RNPEP
Browse Associations

Somatic mutations that impact miRNA target sites


Mutation Mutation ID Sample Name Cancer Type
chr1:g.201999980A>C COSM1337870 TCGA-AD-6964-01 [large_intestine][caecum][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-1296-3p gaggaaaCCCCACTc GAGUGGGG m7b Created HPRO6_3947_G4631.1_201969105
hsa-miR-193b-5p gaggAAACCCCactc CGGGGUUU m7b Created HPRO6_3947_G4631.1_201969105
hsa-miR-3170 gaggaAACCCCActc CUGGGGUU m7b Created HPRO6_3947_G4631.1_201969105
hsa-miR-6742-5p gaggaaACCCCACTc AGUGGGGU m8a Created HPRO6_3947_G4631.1_201969105
hsa-miR-6793-5p gaggaaAACCCACtc UGUGGGUU m7b Disrupted HPRO6_3947_G4631.1_201969105
hsa-miR-6839-3p gaggaAAACCCActc UUGGGUUU m7b Disrupted HPRO6_3947_G4631.1_201969105
hsa-miR-6855-5p gaggaAACCCCActc UUGGGGUU m7b Created HPRO6_3947_G4631.1_201969105
hsa-miR-1296-3p gaggaaaCCCCACTc GAGUGGGG m7b Created HPTA1_611_G842.1_201969122
hsa-miR-193b-5p gaggAAACCCCactc CGGGGUUU m7b Created HPTA1_611_G842.1_201969122
hsa-miR-3170 gaggaAACCCCActc CUGGGGUU m7b Created HPTA1_611_G842.1_201969122
hsa-miR-6742-5p gaggaaACCCCACTc AGUGGGGU m8a Created HPTA1_611_G842.1_201969122
hsa-miR-6793-5p gaggaaAACCCACtc UGUGGGUU m7b Disrupted HPTA1_611_G842.1_201969122
hsa-miR-6839-3p gaggaAAACCCActc UUGGGUUU m7b Disrupted HPTA1_611_G842.1_201969122
hsa-miR-6855-5p gaggaAACCCCActc UUGGGGUU m7b Created HPTA1_611_G842.1_201969122

Mutation Mutation ID Sample Name Cancer Type
chr1:g.201999961G>T COSM531799 TCGA-38-4629-01 [lung][NS][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-219b-5p gcacatGGACATCac AGAUGUCC m7b Disrupted HPCB1_1867_G2336.1_201969081
hsa-miR-3171 gcacatgTACATCac AGAUGUAU m6b Created HPCB1_1867_G2336.1_201969081
hsa-miR-3912-5p gcacATGGACATcac AUGUCCAU m8a Disrupted HPCB1_1867_G2336.1_201969081
hsa-miR-4666a-5p gcACATGTAcatcac AUACAUGU m7b (m6b->m7b) HPCB1_1867_G2336.1_201969081
hsa-miR-493-5p gcacATGTACAtcac UUGUACAU m7b Created HPCB1_1867_G2336.1_201969081
hsa-miR-219b-5p gcacatGGACATCac AGAUGUCC m7b Disrupted HPCB3_1004_G1389.1_201969086
hsa-miR-3171 gcacatgTACATCac AGAUGUAU m6b Created HPCB3_1004_G1389.1_201969086
hsa-miR-3912-5p gcacATGGACATcac AUGUCCAU m8a Disrupted HPCB3_1004_G1389.1_201969086
hsa-miR-4666a-5p gcACATGTAcatcac AUACAUGU m7b (m6b->m7b) HPCB3_1004_G1389.1_201969086
hsa-miR-493-5p gcacATGTACAtcac UUGUACAU m7b Created HPCB3_1004_G1389.1_201969086

Mutation Mutation ID Sample Name Cancer Type
chr1:g.201999954G>A COSM146734 GC8_T [stomach][NS][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-628-5p tgcGTCAGCAcatgg AUGCUGAC m7b Disrupted HPCB1_1867_G2336.1_201969081
hsa-miR-653-5p tgcgTCAACACatgg GUGUUGAA m7a Created HPCB1_1867_G2336.1_201969081
hsa-miR-628-5p tgcGTCAGCAcatgg AUGCUGAC m7b Disrupted HPCB3_1004_G1389.1_201969086
hsa-miR-653-5p tgcgTCAACACatgg GUGUUGAA m7a Created HPCB3_1004_G1389.1_201969086
hsa-miR-628-5p tgcGTCAGCAcatgg AUGCUGAC m7b Disrupted HPCB1_1867_G2336.1_201969081
hsa-miR-653-5p tgcgTCAACACatgg GUGUUGAA m7a Created HPCB1_1867_G2336.1_201969081
hsa-miR-628-5p tgcGTCAGCAcatgg AUGCUGAC m7b Disrupted HPCB3_1004_G1389.1_201969086
hsa-miR-653-5p tgcgTCAACACatgg GUGUUGAA m7a Created HPCB3_1004_G1389.1_201969086

Mutation Mutation ID Sample Name Cancer Type
chr1:g.201999950G>C COSM1500454 TCGA-44-7670-01 [lung][right_upper_lobe][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-1827 ctgCTGCCTCAgcac UGAGGCAG m8a Created HPCB3_1004_G1389.1_201969086
hsa-miR-1910-3p ctgCTGCCTCagcac GAGGCAGA m7a Created HPCB3_1004_G1389.1_201969086
hsa-miR-4649-3p ctgctGCCTCAGcac UCUGAGGC m7b Created HPCB3_1004_G1389.1_201969086
hsa-miR-4663 ctgctgcCTCAGCac AGCUGAGC m6b Created HPCB3_1004_G1389.1_201969086
hsa-miR-628-5p ctgctgcGTCAGCAc AUGCUGAC m7b Disrupted HPCB3_1004_G1389.1_201969086
hsa-miR-7160-5p ctgctgCCTCAGCAc UGCUGAGG m8a Created HPCB3_1004_G1389.1_201969086
hsa-miR-8077 ctgctgcCTCAGCac GGCUGAGU m6b Created HPCB3_1004_G1389.1_201969086

Mutation Mutation ID Sample Name Cancer Type
chr1:g.201999950G>A COSM3934395 ESCC-083T [oesophagus][NS][carcinoma][NS]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-4502 ctgctgCATCAGCac GCUGAUGA m7a Created HPCB3_1004_G1389.1_201969086
hsa-miR-628-5p ctgctgcGTCAGCAc AUGCUGAC m7b Disrupted HPCB3_1004_G1389.1_201969086
hsa-miR-8075 ctgctgCATCAGCAc UGCUGAUG m8a Created HPCB3_1004_G1389.1_201969086
hsa-miR-4502 ctgctgCATCAGCac GCUGAUGA m7a Created HPCB3_1004_G1389.1_201969086
hsa-miR-628-5p ctgctgcGTCAGCAc AUGCUGAC m7b Disrupted HPCB3_1004_G1389.1_201969086
hsa-miR-8075 ctgctgCATCAGCAc UGCUGAUG m8a Created HPCB3_1004_G1389.1_201969086

Mutation Mutation ID Sample Name Cancer Type
chr1:g.201997510G>A COSM298023 TCGA-AA-3989-01 [large_intestine][colon][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-205-5p aATGAAGGtttcacc UCCUUCAU m7b Disrupted HPSEF_1082_G1285.1_201966633

Mutation Mutation ID Sample Name Cancer Type
chr1:g.201997504A>T COSM2153283 TCGA-06-5417-01 [central_nervous_system][brain][glioma][astrocytoma_Grade_IV]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-205-5p tggctcaATGAAGGt UCCUUCAU m7b Disrupted HPSEF_1082_G1285.1_201966633
hsa-miR-205-5p tggctcaATGAAGGt UCCUUCAU m7b Disrupted HPSEF_1082_G1285.1_201966633

Mutation Mutation ID Sample Name Cancer Type
chr1:g.201997391C>T COSM902271 TCGA-B5-A11E-01 [endometrium][NS][carcinoma][endometrioid_carcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-1236-5p ttGTCACTCcctgcc UGAGUGAC m7b (m6b->m7b) HPRO6_3946_G4629.1_201966521
hsa-miR-1909-3p ttgtcacCCCCTGCc CGCAGGGG m7b Disrupted HPRO6_3946_G4629.1_201966521
hsa-miR-4270 ttgtcaCTCCCTGcc UCAGGGAG m7b Created HPRO6_3946_G4629.1_201966521
hsa-miR-4441 ttgtcaCTCCCTGcc ACAGGGAG m7b Created HPRO6_3946_G4629.1_201966521
hsa-miR-6722-3p ttgtcacCCCCTGCc UGCAGGGG m7b Disrupted HPRO6_3946_G4629.1_201966521
hsa-miR-6732-5p ttgtcACCCCCTgcc UAGGGGGU m7b Disrupted HPRO6_3946_G4629.1_201966521
hsa-miR-6752-5p ttgtCACCCCCtgcc GGGGGGUG m7b Disrupted HPRO6_3946_G4629.1_201966521
hsa-miR-6754-5p ttgtcaCTCCCTGcc CCAGGGAG m7b Created HPRO6_3946_G4629.1_201966521
hsa-miR-6798-5p ttgtcaCCCCCTGcc CCAGGGGG m7b Disrupted HPRO6_3946_G4629.1_201966521
hsa-miR-6842-5p ttgtCACCCCCtgcc UGGGGGUG m7b Disrupted HPRO6_3946_G4629.1_201966521
hsa-miR-7110-5p ttgtCACCCCCtgcc UGGGGGUG m7b Disrupted HPRO6_3946_G4629.1_201966521

*By default, only target sites identified by TargetScan are displayed. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.

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