SomamiR DB 2.0
Somatic mutations altering microRNA-ceRNA interactions
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PolymiRTS Database
Prediction criteria: TargetScan sites only     All 6mer or longer seed matches
Transcript ID: NR_003129
Gene Symbol: RNF5P1
Browse Associations

Somatic mutations that impact miRNA target sites


Mutation Mutation ID Sample Name Cancer Type
chr8:g.38601067T>A COSN2380444 TCGA-05-4424-01 [lung][NS][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-125a-3p ggcCACCTGTactgt ACAGGUGA m7a Disrupted HHHSE_15624_RNF5P1|NR_003129-8|exon_non_coding|-2.50895235266326|2.62292372010584
hsa-miR-1278 ggccacCAGTACTgt UAGUACUG m7b Created HHHSE_15624_RNF5P1|NR_003129-8|exon_non_coding|-2.50895235266326|2.62292372010584
hsa-miR-4456 ggCCACCAGtactgt CCUGGUGG m7b (m6b->m7b) HHHSE_15624_RNF5P1|NR_003129-8|exon_non_coding|-2.50895235266326|2.62292372010584
hsa-miR-552-3p ggcCACCTGTactgt AACAGGUG m7b Disrupted HHHSE_15624_RNF5P1|NR_003129-8|exon_non_coding|-2.50895235266326|2.62292372010584
hsa-miR-125a-3p ggcCACCTGTactgt ACAGGUGA m7a Disrupted HHHNE_15624_RNF5P1|NR_003129-8|exon_non_coding|-2.50895235266326|2.62292372010584
hsa-miR-1278 ggccacCAGTACTgt UAGUACUG m7b Created HHHNE_15624_RNF5P1|NR_003129-8|exon_non_coding|-2.50895235266326|2.62292372010584
hsa-miR-4456 ggCCACCAGtactgt CCUGGUGG m7b (m6b->m7b) HHHNE_15624_RNF5P1|NR_003129-8|exon_non_coding|-2.50895235266326|2.62292372010584
hsa-miR-552-3p ggcCACCTGTactgt AACAGGUG m7b Disrupted HHHNE_15624_RNF5P1|NR_003129-8|exon_non_coding|-2.50895235266326|2.62292372010584

*By default, only target sites identified by TargetScan are displayed. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.

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