SomamiR DB 2.0
Somatic mutations altering microRNA-ceRNA interactions
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PolymiRTS Database
Prediction criteria: TargetScan sites only     All 6mer or longer seed matches
Transcript ID: hsa_circ_0075577
Gene Symbol: RIOK1
Browse Associations

Somatic mutations that impact miRNA target sites


Mutation Mutation ID Sample Name Cancer Type
chr6:g.7417385C>T COSM3629701 TCGA-D3-A2JN-06 [skin][NS][malignant_melanoma][NS]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-5680 caaaATTTCTaaaca GAGAAAUG m6b Created HHFKP_125554_cluster-18994_1_16

Mutation Mutation ID Sample Name Cancer Type
chr6:g.7417366G>T COSM1081554 TCGA-D1-A17Q-01 [endometrium][NS][carcinoma][endometrioid_carcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-3675-3p agAGAGATaaaagaa CAUCUCUA m6b Created HHFKP_125554_cluster-18994_1_16
hsa-miR-4768-5p agaGAGAGAAaagaa AUUCUCUC m7b Disrupted HHFKP_125554_cluster-18994_1_16
hsa-miR-627-3p agagagAGAAAAGAa UCUUUUCU m8a Disrupted HHFKP_125554_cluster-18994_1_16
hsa-miR-6809-3p agagAGAGAAaagaa CUUCUCUU m6b Disrupted HHFKP_125554_cluster-18994_1_16
hsa-miR-6817-3p agAGAGAGAaaagaa UCUCUCUG m7a (m7a->m6a) HHFKP_125554_cluster-18994_1_16
hsa-miR-6833-3p agaGAGAGAAAagaa UUUCUCUC m8a Disrupted HHFKP_125554_cluster-18994_1_16
hsa-miR-6873-3p agAGAGAGAAaagaa UUCUCUCU m8a Disrupted HHFKP_125554_cluster-18994_1_16
hsa-miR-7110-3p aGAGAGAGAaaagaa UCUCUCUC m8a (m8a->m7a) HHFKP_125554_cluster-18994_1_16

Mutation Mutation ID Sample Name Cancer Type
chr6:g.7417358CAG>C COSM4721816 T3059 [large_intestine][colon][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-3187-5p ggaaGCCCAGagagaga CCUGGGCA m6b Disrupted HHFKP_125554_cluster-18994_1_16
hsa-miR-3191-5p ggaagcCCAGAGAGaga CUCUCUGG m8a Disrupted HHFKP_125554_cluster-18994_1_16
hsa-miR-326 ggaagCCCAGAGagaga CCUCUGGG m7b Disrupted HHFKP_125554_cluster-18994_1_16
hsa-miR-330-5p ggaagCCCAGAGAgaga UCUCUGGG m8a Disrupted HHFKP_125554_cluster-18994_1_16
hsa-miR-378g ggaAGCCCAGagagaga ACUGGGCU m7b Disrupted HHFKP_125554_cluster-18994_1_16
hsa-miR-4314 ggaagCCCAGAGagaga CUCUGGGA m7a Disrupted HHFKP_125554_cluster-18994_1_16
hsa-miR-4486 ggaaGCCCAGagagaga GCUGGGCG m6b Disrupted HHFKP_125554_cluster-18994_1_16
hsa-miR-4674 ggaAGCCCAGagagaga CUGGGCUC m7a Disrupted HHFKP_125554_cluster-18994_1_16
hsa-miR-612 ggaaGCCCAGagagaga GCUGGGCA m6b Disrupted HHFKP_125554_cluster-18994_1_16
hsa-miR-6817-3p ggaagccCAGAGAGAga UCUCUCUG m8a Disrupted HHFKP_125554_cluster-18994_1_16
hsa-miR-6860 ggaaGCCCAGagagaga ACUGGGCA m6b Disrupted HHFKP_125554_cluster-18994_1_16

Mutation Mutation ID Sample Name Cancer Type
chr6:g.7414281C>G COSM3162355 SW948 [large_intestine][NS][other][neoplasm]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-2115-3p acttgTTCTGATtca CAUCAGAA m7b Disrupted HHKTA_26802_NM_031480|1627|1666|2.76914822731246|1.09095540974437
hsa-miR-3529-3p acTTGTTGTgattca AACAACAA m7b (m6b->m7b) HHKTA_26802_NM_031480|1627|1666|2.76914822731246|1.09095540974437
hsa-miR-4773 actTGTTCTGattca CAGAACAG m7a Disrupted HHKTA_26802_NM_031480|1627|1666|2.76914822731246|1.09095540974437
hsa-miR-5003-5p actTGTTGTGAttca UCACAACA m8a Created HHKTA_26802_NM_031480|1627|1666|2.76914822731246|1.09095540974437
hsa-miR-589-3p actTGTTCTGAttca UCAGAACA m8a Disrupted HHKTA_26802_NM_031480|1627|1666|2.76914822731246|1.09095540974437

Mutation Mutation ID Sample Name Cancer Type
chr6:g.7414259C>G COSM4818935 TCGA-EK-A2H0-01 [cervix][NS][carcinoma][squamous_cell_carcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-153-5p agAAAATGAagtgga UCAUUUUU m7a (m6a->m7a) HHKTA_26802_NM_031480|1627|1666|2.76914822731246|1.09095540974437
hsa-miR-3614-5p agaaaatCAAGTGGa CCACUUGG m7a Disrupted HHKTA_26802_NM_031480|1627|1666|2.76914822731246|1.09095540974437
hsa-miR-5696 agaAAATGAagtgga CUCAUUUA m6b Created HHKTA_26802_NM_031480|1627|1666|2.76914822731246|1.09095540974437

*By default, only target sites identified by TargetScan are displayed. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.

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