SomamiR DB 2.0
Somatic mutations altering microRNA-ceRNA interactions
  Home Search Help Download  

PolymiRTS Database

Prediction criteria: TargetScan sites only     All 6mer or longer seed matches

Transcript ID: hsa_circ_0050435
Gene Symbol: RHPN2
Browse Associations

Somatic mutations that impact miRNA target sites



Mutation Mutation ID Sample Name Cancer Type
chr19:g.33002825G>A COSM4721627 T55 [liver][NS][carcinoma][hepatocellular_carcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-6791-3p tggctcAGGAGGCtg UGCCUCCU m7b Disrupted HHFKP_70463_cluster-12262_7_103
hsa-miR-526b-5p tggCTCAAGAGgctg CUCUUGAG m8a Created HHFKP_70463_cluster-12262_7_103
hsa-miR-544b tggCTCAGGaggctg ACCUGAGG m6b Disrupted HHFKP_70463_cluster-12262_7_103
hsa-miR-660-3p tggctCAGGAGGctg ACCUCCUG m7b Disrupted HHFKP_70463_cluster-12262_7_103
hsa-miR-6751-3p tGGCTCAGgaggctg ACUGAGCC m7b Disrupted HHFKP_70463_cluster-12262_7_103
hsa-miR-6781-3p tggctcAAGAGGCtg UGCCUCUU m7b Created HHFKP_70463_cluster-12262_7_103
hsa-miR-6819-3p tggctcaAGAGGCTg AAGCCUCU m7b Created HHFKP_70463_cluster-12262_7_103
hsa-miR-6829-3p tggctcAGGAGGCtg UGCCUCCU m7b Disrupted HHFKP_70463_cluster-12262_7_103
hsa-miR-6877-3p tggctcaAGAGGCTg CAGCCUCU m7b Created HHFKP_70463_cluster-12262_7_103
hsa-miR-3653-5p tggcTCAGGAGGctg CCUCCUGA m8a Disrupted HHFKP_70463_cluster-12262_7_103
hsa-miR-1200 tggCTCAGGAGgctg CUCCUGAG m8a Disrupted HHFKP_70463_cluster-12262_7_103
hsa-miR-2682-3p tggctcAAGAGGCtg CGCCUCUU m7b Created HHFKP_70463_cluster-12262_7_103
hsa-miR-1199-5p tGGCTCAGGaggctg CCUGAGCC m8a (m8a->m7a) HHFKP_70463_cluster-12262_7_103
hsa-miR-4324 tggCTCAGGaggctg CCCUGAGA m6b Disrupted HHFKP_70463_cluster-12262_7_103

*By default, only target sites identified by TargetScan are displayed. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.

Genome Browser