SomamiR DB 2.0
Somatic mutations altering microRNA-ceRNA interactions
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PolymiRTS Database

Prediction criteria: TargetScan sites only     All 6mer or longer seed matches

Transcript ID: hsa_circ_0050430
Gene Symbol: RHPN2
Browse Associations

Somatic mutations that impact miRNA target sites



Mutation Mutation ID Sample Name Cancer Type
chr19:g.32991825T>C COSM1392640 TCGA-D5-6541-01 [large_intestine][colon][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-4655-5p ctctgCCCCGGTaag CACCGGGG m7b Created HPSLC_9976_G11772.1_33482740
hsa-miR-4523 ctctgcCTCGGTaag GACCGAGA m6b Disrupted HPSLC_9976_G11772.1_33482740
hsa-miR-1910-3p cTCTGCCTCggtaag GAGGCAGA m8a (m8a->m7a) HPSLC_9976_G11772.1_33482740
hsa-miR-1827 ctCTGCCTCggtaag UGAGGCAG m7b (m7b->m6b) HPSLC_9976_G11772.1_33482740
hsa-miR-6784-5p ctctGCCCCGGtaag GCCGGGGC m7b Created HPSLC_9976_G11772.1_33482740
hsa-miR-6775-5p ctcTGCCCCGgtaag UCGGGGCA m7b Created HPSLC_9976_G11772.1_33482740
hsa-miR-6511a-5p cTCTGCCTcggtaag CAGGCAGA m7b Disrupted HPSLC_9976_G11772.1_33482740
hsa-miR-5090 ctcTGCCCCGGtaag CCGGGGCA m8a Created HPSLC_9976_G11772.1_33482740
hsa-miR-486-3p ctCTGCCCCGgtaag CGGGGCAG m8a Created HPSLC_9976_G11772.1_33482740

Mutation Mutation ID Sample Name Cancer Type
chr19:g.32991824C>T COSM72430 TCGA-13-0923-01 [ovary][NS][carcinoma][serous_carcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-4523 tctgcCTCGGTaagc GACCGAGA m6b Disrupted HPSLC_9976_G11772.1_33482740

Mutation Mutation ID Sample Name Cancer Type
chr19:g.32991823G>T COSM1392639 TCGA-CM-6166-01 [large_intestine][colon][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-6847-5p ctgCCTCTGTaagca ACAGAGGA m7a Created HPSLC_9976_G11772.1_33482740
hsa-miR-600 ctgcctCTGTAAGca ACUUACAG m7b Created HPSLC_9976_G11772.1_33482740
hsa-miR-4797-5p ctgcCTCTGTaagca GACAGAGU m6b Created HPSLC_9976_G11772.1_33482740
hsa-miR-4523 ctgcCTCGGTaagca GACCGAGA m6b Disrupted HPSLC_9976_G11772.1_33482740

Mutation Mutation ID Sample Name Cancer Type
chr19:g.32991823G>A COSM1392638 TCGA-AU-6004-01 [large_intestine][caecum][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-1827 CTGCCTCAgtaagca UGAGGCAG m8a Created HPSLC_9976_G11772.1_33482740
hsa-miR-4523 ctgcCTCGGTaagca GACCGAGA m6b Disrupted HPSLC_9976_G11772.1_33482740
hsa-miR-4649-3p ctGCCTCAGtaagca UCUGAGGC m7b (m6b->m7b) HPSLC_9976_G11772.1_33482740

*By default, only target sites identified by TargetScan are displayed. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.

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