SomamiR DB 2.0
Somatic mutations altering microRNA-ceRNA interactions
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PolymiRTS Database

Prediction criteria: TargetScan sites only     All 6mer or longer seed matches

Transcript ID: NM_001005339
Gene Symbol: RGS10
Browse Associations

Somatic mutations that impact miRNA target sites



Mutation Mutation ID Sample Name Cancer Type
chr10:g.119500257C>A COSM3806563 TCGA-AN-A046-01 [breast][NS][carcinoma][NS]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-3156-5p cttAGATCTTTaatc AAAGAUCU m8a Disrupted HHFCT_19414_cluster-3194_2_8
hsa-miR-3156-5p cttAGATCTTTaatc AAAGAUCU m8a Disrupted HHFKP_18584_cluster-3194_3_11

Mutation Mutation ID Sample Name Cancer Type
chr10:g.119500253A>T COSM1745664 B89-10-Tumor [urinary_tract][bladder][carcinoma][NS]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-5186 gatctttAATCTCat AGAGAUUG m6b Disrupted HHFCT_19414_cluster-3194_2_8
hsa-miR-577 gatctTTTATCTcat UAGAUAAA m7b Created HHFCT_19414_cluster-3194_2_8
hsa-miR-5186 gatctttAATCTCat AGAGAUUG m6b Disrupted HHFKP_18584_cluster-3194_3_11
hsa-miR-577 gatctTTTATCTcat UAGAUAAA m7b Created HHFKP_18584_cluster-3194_3_11

Mutation Mutation ID Sample Name Cancer Type
chr10:g.119500248C>G COSM4426817 385 [large_intestine][colon][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-2115-3p ttaaTCTGATGaagt CAUCAGAA m7a Created HHFCT_19414_cluster-3194_2_8
hsa-miR-433-3p ttaatcTCATGAagt AUCAUGAU m6b Disrupted HHFCT_19414_cluster-3194_2_8
hsa-miR-5186 ttAATCTCatgaagt AGAGAUUG m6b Disrupted HHFCT_19414_cluster-3194_2_8
hsa-miR-10b-3p ttAATCTGatgaagt ACAGAUUC m6b Created HHFKP_18584_cluster-3194_3_11
hsa-miR-2115-3p ttaaTCTGATGaagt CAUCAGAA m7a Created HHFKP_18584_cluster-3194_3_11
hsa-miR-433-3p ttaatcTCATGAagt AUCAUGAU m6b Disrupted HHFKP_18584_cluster-3194_3_11
hsa-miR-5186 ttAATCTCatgaagt AGAGAUUG m6b Disrupted HHFKP_18584_cluster-3194_3_11

Mutation Mutation ID Sample Name Cancer Type
chr10:g.119500227C>T COSM4796429 CHC892T [liver][NS][carcinoma][hepatocellular_carcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-1183 gCTACAGTcgcttct CACUGUAG m7b Created HHFCT_19414_cluster-3194_2_8
hsa-miR-1183 gCTACAGTcgcttct CACUGUAG m7b Created HHFKP_18584_cluster-3194_3_11

Mutation Mutation ID Sample Name Cancer Type
chr10:g.119500225G>A COSM915357 TCGA-B5-A11E-01 [endometrium][NS][carcinoma][endometrioid_carcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-4795-5p tacagCCACTTCTta AGAAGUGG m8a Created HHFCT_19414_cluster-3194_2_8
hsa-miR-4795-5p tacagCCACTTCTta AGAAGUGG m8a Created HHFKP_18584_cluster-3194_3_11

Mutation Mutation ID Sample Name Cancer Type
chr10:g.119500163C>T COSM202589 TCGA-AA-3984-01 [large_intestine][colon][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-1324 agattTGTCTGatgc CCAGACAG m6b Created HHFCT_19413_cluster-3194_1_13
hsa-miR-4269 agattTGCCTGatgc GCAGGCAC m6b Disrupted HHFCT_19413_cluster-3194_1_13
hsa-miR-4514 agattTGCCTGatgc ACAGGCAG m6b Disrupted HHFCT_19413_cluster-3194_1_13
hsa-miR-4742-5p agatTTGCCTGAtgc UCAGGCAA m8a Disrupted HHFCT_19413_cluster-3194_1_13
hsa-miR-6715b-5p agattTGCCTGatgc ACAGGCAC m6b Disrupted HHFCT_19413_cluster-3194_1_13

Mutation Mutation ID Sample Name Cancer Type
chr10:g.119500054G>A COSN8150166 PCSI_0044_Pa_P_526 [pancreas][NS][carcinoma][NS]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-3622b-5p caggaCCATGCCggg AGGCAUGG m7b Created HHFKP_18582_cluster-3194_1_9
hsa-miR-4304 caggacCATGCCGGg CCGGCAUG m8a Created HHFKP_18582_cluster-3194_1_9
hsa-miR-564 caggaCCGTGCCggg AGGCACGG m7b Disrupted HHFKP_18582_cluster-3194_1_9
hsa-miR-3622b-5p caggaCCATGCCggg AGGCAUGG m7b Created HHKTA_17144_NM_001005339|654|693|4.19699028202044|1.23112489041846
hsa-miR-4304 caggacCATGCCGGg CCGGCAUG m8a Created HHKTA_17144_NM_001005339|654|693|4.19699028202044|1.23112489041846
hsa-miR-564 caggaCCGTGCCggg AGGCACGG m7b Disrupted HHKTA_17144_NM_001005339|654|693|4.19699028202044|1.23112489041846
hsa-miR-3622b-5p caggaCCATGCCggg AGGCAUGG m7b Created HPRO6_13334_G15484.1_121259571
hsa-miR-4304 caggacCATGCCGGg CCGGCAUG m8a Created HPRO6_13334_G15484.1_121259571
hsa-miR-564 caggaCCGTGCCggg AGGCACGG m7b Disrupted HPRO6_13334_G15484.1_121259571
hsa-miR-3622b-5p caggaCCATGCCggg AGGCAUGG m7b Created HPTA3_3168_G4814.1_121259557
hsa-miR-4304 caggacCATGCCGGg CCGGCAUG m8a Created HPTA3_3168_G4814.1_121259557
hsa-miR-564 caggaCCGTGCCggg AGGCACGG m7b Disrupted HPTA3_3168_G4814.1_121259557
hsa-miR-3622b-5p caggaCCATGCCggg AGGCAUGG m7b Created HPTK1_5282_G6223.1_121259566
hsa-miR-4304 caggacCATGCCGGg CCGGCAUG m8a Created HPTK1_5282_G6223.1_121259566
hsa-miR-564 caggaCCGTGCCggg AGGCACGG m7b Disrupted HPTK1_5282_G6223.1_121259566
hsa-miR-3622b-5p caggaCCATGCCggg AGGCAUGG m7b Created HHFKP_18582_cluster-3194_1_9
hsa-miR-4304 caggacCATGCCGGg CCGGCAUG m8a Created HHFKP_18582_cluster-3194_1_9
hsa-miR-564 caggaCCGTGCCggg AGGCACGG m7b Disrupted HHFKP_18582_cluster-3194_1_9
hsa-miR-3622b-5p caggaCCATGCCggg AGGCAUGG m7b Created HHKTA_17144_NM_001005339|654|693|4.19699028202044|1.23112489041846
hsa-miR-4304 caggacCATGCCGGg CCGGCAUG m8a Created HHKTA_17144_NM_001005339|654|693|4.19699028202044|1.23112489041846
hsa-miR-564 caggaCCGTGCCggg AGGCACGG m7b Disrupted HHKTA_17144_NM_001005339|654|693|4.19699028202044|1.23112489041846
hsa-miR-3622b-5p caggaCCATGCCggg AGGCAUGG m7b Created HPRO6_13334_G15484.1_121259571
hsa-miR-4304 caggacCATGCCGGg CCGGCAUG m8a Created HPRO6_13334_G15484.1_121259571
hsa-miR-564 caggaCCGTGCCggg AGGCACGG m7b Disrupted HPRO6_13334_G15484.1_121259571
hsa-miR-3622b-5p caggaCCATGCCggg AGGCAUGG m7b Created HPTA3_3168_G4814.1_121259557
hsa-miR-4304 caggacCATGCCGGg CCGGCAUG m8a Created HPTA3_3168_G4814.1_121259557
hsa-miR-564 caggaCCGTGCCggg AGGCACGG m7b Disrupted HPTA3_3168_G4814.1_121259557
hsa-miR-3622b-5p caggaCCATGCCggg AGGCAUGG m7b Created HPTK1_5282_G6223.1_121259566
hsa-miR-4304 caggacCATGCCGGg CCGGCAUG m8a Created HPTK1_5282_G6223.1_121259566
hsa-miR-564 caggaCCGTGCCggg AGGCACGG m7b Disrupted HPTK1_5282_G6223.1_121259566

*By default, only target sites identified by TargetScan are displayed. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.

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