SomamiR DB 2.0
Somatic mutations altering microRNA-ceRNA interactions
  Home Search Help Download  

PolymiRTS Database

Prediction criteria: TargetScan sites only     All 6mer or longer seed matches

Transcript ID: NM_002908
Gene Symbol: REL
Browse Associations

Somatic mutations that impact miRNA target sites



Mutation Mutation ID Sample Name Cancer Type
chr2:g.60922294C>T COSM3380183 PCSI_0139_Pa_X [pancreas][NS][carcinoma][NS]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-3925-5p cagatGTTCTCTTcc AAGAGAAC m8a Created HHFCT_88477_uc002sam.1_6_19
hsa-miR-5004-5p cagaTGTCCTCttcc UGAGGACA m7b Disrupted HHFCT_88477_uc002sam.1_6_19

Mutation Mutation ID Sample Name Cancer Type
chr2:g.60922293T>C COSM1022023 TCGA-AP-A0LM-01 [endometrium][NS][carcinoma][endometrioid_carcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-3616-3p tcagaTGCCCTCttc CGAGGGCA m7b Created HHFCT_88477_uc002sam.1_6_19
hsa-miR-4761-3p tcagATGCCCTCttc GAGGGCAU m8a Created HHFCT_88477_uc002sam.1_6_19
hsa-miR-5004-5p tcagaTGTCCTCttc UGAGGACA m7b Disrupted HHFCT_88477_uc002sam.1_6_19

Mutation Mutation ID Sample Name Cancer Type
chr2:g.60922146C>T COSM4720986 T3724 [large_intestine][colon][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-4524b-3p caacatgCTGTCTaa GAGACAGG m6b Disrupted HPSD3_5378_G7158.1_61149286

Mutation Mutation ID Sample Name Cancer Type
chr2:g.60921905A>G COSM1483173 TCGA-C8-A26X-01 [breast][NS][carcinoma][NS]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-4267 cttcttcGAGCTGGt UCCAGCUC m7b Created HHFKP_81687_uc002sam.1_3_138
hsa-miR-4635 cttCTTCAAGctggt UCUUGAAG m7b Disrupted HHFKP_81687_uc002sam.1_3_138

Mutation Mutation ID Sample Name Cancer Type
chr2:g.60921889C>T COSM3799095 TCGA-GC-A3RC-01 [urinary_tract][bladder][carcinoma][NS]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID

No TargetScan sites are altered. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.

*By default, only target sites identified by TargetScan are displayed. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.

Genome Browser