SomamiR DB 2.0
Somatic mutations altering microRNA-ceRNA interactions
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PolymiRTS Database
Prediction criteria: TargetScan sites only     All 6mer or longer seed matches
Transcript ID: hsa_circ_0064641
Gene Symbol: RBMS3
Browse Associations

Somatic mutations that impact miRNA target sites

Mutation Mutation ID Sample Name Cancer Type
chr3:g.29800400T>C COSN6765159 RK187_C01 [liver][NS][carcinoma][NS]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
No TargetScan sites are altered. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.


Mutation Mutation ID Sample Name Cancer Type
chr3:g.29767313T>C COSN14593451 8070202 [pancreas][NS][carcinoma][NS]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-3148 ttgtTTTTTCCtgta UGGAAAAA m7b Disrupted HHFKP_101592_cluster-15816_49_8
hsa-miR-4433a-3p ttgttttCTCCTGTa ACAGGAGU m7a Created HHFKP_101592_cluster-15816_49_8
hsa-miR-4768-3p ttgtttTCTCCTGta CCAGGAGA m7b Created HHFKP_101592_cluster-15816_49_8

Mutation Mutation ID Sample Name Cancer Type
chr3:g.29762965C>A COSM3427503 TCGA-F5-6814-01 [large_intestine][rectum][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-30a-3p aaaatatCTGAAAac CUUUCAGU m6b Disrupted HHFCT_109364_cluster-15816_76_16
hsa-miR-30d-3p aaaatatCTGAAAac CUUUCAGU m6b Disrupted HHFCT_109364_cluster-15816_76_16
hsa-miR-30e-3p aaaatatCTGAAAac CUUUCAGU m6b Disrupted HHFCT_109364_cluster-15816_76_16
hsa-miR-3145-3p aAAATATCTgaaaac AGAUAUUU m8a (m8a->m7a) HHFCT_109364_cluster-15816_76_16
hsa-miR-335-3p aaaatatATGAAAAc UUUUUCAU m7b Created HHFCT_109364_cluster-15816_76_16
hsa-miR-3942-3p aaaatATCTGAAAac UUUCAGAU m8a Disrupted HHFCT_109364_cluster-15816_76_16
hsa-miR-5007-3p aaaatATATGAaaac AUCAUAUG m6b Created HHFCT_109364_cluster-15816_76_16
hsa-miR-5100 aaaatATCTGAAaac UUCAGAUC m7a Disrupted HHFCT_109364_cluster-15816_76_16
hsa-miR-30a-3p aaaatatCTGAAAac CUUUCAGU m6b Disrupted HPCB1_26437_G33594.1_29804448
hsa-miR-30d-3p aaaatatCTGAAAac CUUUCAGU m6b Disrupted HPCB1_26437_G33594.1_29804448
hsa-miR-30e-3p aaaatatCTGAAAac CUUUCAGU m6b Disrupted HPCB1_26437_G33594.1_29804448
hsa-miR-3145-3p aAAATATCTgaaaac AGAUAUUU m8a (m8a->m7a) HPCB1_26437_G33594.1_29804448
hsa-miR-335-3p aaaatatATGAAAAc UUUUUCAU m7b Created HPCB1_26437_G33594.1_29804448
hsa-miR-3942-3p aaaatATCTGAAAac UUUCAGAU m8a Disrupted HPCB1_26437_G33594.1_29804448
hsa-miR-5007-3p aaaatATATGAaaac AUCAUAUG m6b Created HPCB1_26437_G33594.1_29804448
hsa-miR-5100 aaaatATCTGAAaac UUCAGAUC m7a Disrupted HPCB1_26437_G33594.1_29804448
hsa-miR-30a-3p aaaatatCTGAAAac CUUUCAGU m6b Disrupted HHFCT_109364_cluster-15816_76_16
hsa-miR-30d-3p aaaatatCTGAAAac CUUUCAGU m6b Disrupted HHFCT_109364_cluster-15816_76_16
hsa-miR-30e-3p aaaatatCTGAAAac CUUUCAGU m6b Disrupted HHFCT_109364_cluster-15816_76_16
hsa-miR-3145-3p aAAATATCTgaaaac AGAUAUUU m8a (m8a->m7a) HHFCT_109364_cluster-15816_76_16
hsa-miR-335-3p aaaatatATGAAAAc UUUUUCAU m7b Created HHFCT_109364_cluster-15816_76_16
hsa-miR-3942-3p aaaatATCTGAAAac UUUCAGAU m8a Disrupted HHFCT_109364_cluster-15816_76_16
hsa-miR-5007-3p aaaatATATGAaaac AUCAUAUG m6b Created HHFCT_109364_cluster-15816_76_16
hsa-miR-5100 aaaatATCTGAAaac UUCAGAUC m7a Disrupted HHFCT_109364_cluster-15816_76_16
hsa-miR-30a-3p aaaatatCTGAAAac CUUUCAGU m6b Disrupted HPCB1_26437_G33594.1_29804448
hsa-miR-30d-3p aaaatatCTGAAAac CUUUCAGU m6b Disrupted HPCB1_26437_G33594.1_29804448
hsa-miR-30e-3p aaaatatCTGAAAac CUUUCAGU m6b Disrupted HPCB1_26437_G33594.1_29804448
hsa-miR-3145-3p aAAATATCTgaaaac AGAUAUUU m8a (m8a->m7a) HPCB1_26437_G33594.1_29804448
hsa-miR-335-3p aaaatatATGAAAAc UUUUUCAU m7b Created HPCB1_26437_G33594.1_29804448
hsa-miR-3942-3p aaaatATCTGAAAac UUUCAGAU m8a Disrupted HPCB1_26437_G33594.1_29804448
hsa-miR-5007-3p aaaatATATGAaaac AUCAUAUG m6b Created HPCB1_26437_G33594.1_29804448
hsa-miR-5100 aaaatATCTGAAaac UUCAGAUC m7a Disrupted HPCB1_26437_G33594.1_29804448

Mutation Mutation ID Sample Name Cancer Type
chr3:g.29762963A>T COSM446338 TCGA-AN-A0FW-01 [breast][NS][carcinoma][NS]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-3145-3p ggaAAATATCTgaaa AGAUAUUU m8a Disrupted HHFCT_109364_cluster-15816_76_16
hsa-miR-3942-3p ggaaaatATCTGAAa UUUCAGAU m7b Disrupted HHFCT_109364_cluster-15816_76_16
hsa-miR-5100 ggaaaatATCTGAAa UUCAGAUC m7a Disrupted HHFCT_109364_cluster-15816_76_16
hsa-miR-3145-3p ggaAAATATCTgaaa AGAUAUUU m8a Disrupted HPCB1_26437_G33594.1_29804448
hsa-miR-3942-3p ggaaaatATCTGAAa UUUCAGAU m7b Disrupted HPCB1_26437_G33594.1_29804448
hsa-miR-5100 ggaaaatATCTGAAa UUCAGAUC m7a Disrupted HPCB1_26437_G33594.1_29804448

Mutation Mutation ID Sample Name Cancer Type
chr3:g.29762938G>A COSM4553322 CSCC-32-T [skin][head_neck][carcinoma][squamous_cell_carcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-1255b-2-3p tgAAGTGGTaattca AACCACUU m7b (m7b->m6b) HHFCT_109364_cluster-15816_76_16
hsa-miR-34c-3p tgaAGTGATaattca AAUCACUA m6b Created HHFCT_109364_cluster-15816_76_16
hsa-miR-1255b-2-3p tgAAGTGGTaattca AACCACUU m7b (m7b->m6b) HHFCT_109364_cluster-15816_76_16
hsa-miR-34c-3p tgaAGTGATaattca AAUCACUA m6b Created HHFCT_109364_cluster-15816_76_16

*By default, only target sites identified by TargetScan are displayed. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.

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