SomamiR DB 2.0
Somatic mutations altering microRNA-ceRNA interactions
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PolymiRTS Database
Prediction criteria: TargetScan sites only     All 6mer or longer seed matches
Transcript ID: hsa_circ_0064635
Gene Symbol: RBMS3
Browse Associations

Somatic mutations that impact miRNA target sites

Mutation Mutation ID Sample Name Cancer Type
chr3:g.29692381C>T COSN1945495 RK027_C01 [liver][NS][carcinoma][NS]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
No TargetScan sites are altered. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.


Mutation Mutation ID Sample Name Cancer Type
chr3:g.29662471G>T COSN6765108 RK190_C01 [liver][NS][carcinoma][NS]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-495-3p tattctTTTGTTaca AAACAAAC m6b Created HHFCT_109356_cluster-15816_68_8
hsa-miR-4801 tattCTTGTGTtaca UACACAAG m7b Disrupted HHFCT_109356_cluster-15816_68_8
hsa-miR-4731-3p tattCTTGTGTtaca CACACAAG m7b Disrupted HHFCT_109356_cluster-15816_68_8
hsa-miR-7-1-3p tattctTTTGTTaca CAACAAAU m6b Created HHFCT_109356_cluster-15816_68_8
hsa-miR-7-2-3p tattctTTTGTTaca CAACAAAU m6b Created HHFCT_109356_cluster-15816_68_8
hsa-miR-186-5p tATTCTTTtgttaca CAAAGAAU m7b Created HHFCT_109356_cluster-15816_68_8

Mutation Mutation ID Sample Name Cancer Type
chr3:g.29612792T>A COSN9547431 AOCS-090-1-0 [ovary][NS][other][neoplasm]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-299-5p cacatcaTAAACCAa UGGUUUAC m7a Disrupted HHFKP_101582_cluster-15816_39_14
hsa-miR-1322 caCATCATaaaccaa GAUGAUGC m6b Disrupted HHFKP_101582_cluster-15816_39_14

Mutation Mutation ID Sample Name Cancer Type
chr3:g.29612787C>T COSN8366059 tumor_4163639 [haematopoietic_and_lymphoid_tissue][NS][lymphoid_neoplasm][diffuse_large_B_cell_lymphoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-1322 agtcacaCATCATaa GAUGAUGC m6b Disrupted HHFKP_101582_cluster-15816_39_14
hsa-miR-190b agtcACATATCAtaa UGAUAUGU m8a Created HHFKP_101582_cluster-15816_39_14
hsa-miR-190a-5p agtcACATATCAtaa UGAUAUGU m8a Created HHFKP_101582_cluster-15816_39_14
hsa-miR-1272 agtcacaCATCATaa GAUGAUGA m6b Disrupted HHFKP_101582_cluster-15816_39_14
hsa-miR-4501 aGTCACATAtcataa UAUGUGAC m8a (m7a->m8a) HHFKP_101582_cluster-15816_39_14
hsa-miR-6808-3p aGTCACACatcataa GUGUGACC m7a Disrupted HHFKP_101582_cluster-15816_39_14
hsa-miR-6818-5p agTCACACAtcataa UUGUGUGA m7b (m7b->m6b) HHFKP_101582_cluster-15816_39_14

*By default, only target sites identified by TargetScan are displayed. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.

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