SomamiR DB 2.0
Somatic mutations altering microRNA-ceRNA interactions
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PolymiRTS Database
Prediction criteria: TargetScan sites only     All 6mer or longer seed matches
Transcript ID: hsa_circ_0064634
Gene Symbol: RBMS3
Browse Associations

Somatic mutations that impact miRNA target sites


Mutation Mutation ID Sample Name Cancer Type
chr3:g.29488494G>A COSM4116767 TCGA-BR-8680-01 [stomach][NS][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-7703 aatcAGTGCAAaggt UUGCACUC m7a Disrupted HPCB1_26432_G33589.1_29529967
hsa-miR-557 aatcaGTGCAAAggt GUUUGCAC m7b Disrupted HPCB1_26432_G33589.1_29529967
hsa-miR-507 aatcaGTGCAAAggt UUUUGCAC m7b Disrupted HPCB1_26432_G33589.1_29529967
hsa-miR-4325 aatcAGTGCAAaggt UUGCACUU m7a Disrupted HPCB1_26432_G33589.1_29529967
hsa-miR-7703 aatcAGTGCAAaggt UUGCACUC m7a Disrupted HPCB1_26432_G33589.1_29529967
hsa-miR-557 aatcaGTGCAAAggt GUUUGCAC m7b Disrupted HPCB1_26432_G33589.1_29529967
hsa-miR-507 aatcaGTGCAAAggt UUUUGCAC m7b Disrupted HPCB1_26432_G33589.1_29529967
hsa-miR-4325 aatcAGTGCAAaggt UUGCACUU m7a Disrupted HPCB1_26432_G33589.1_29529967
hsa-miR-3121-5p aatcagtGCAAAGGt UCCUUUGC m7b Disrupted HPCB1_26432_G33589.1_29529967
hsa-miR-3121-5p aatcagtGCAAAGGt UCCUUUGC m7b Disrupted HPCB1_26432_G33589.1_29529967

Mutation Mutation ID Sample Name Cancer Type
chr3:g.29488466G>A COSM1692498 YUMER [skin][NS][malignant_melanoma][NS]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-219b-3p tacaaagGCAATTCt AGAAUUGC m7b Disrupted HHFCT_109329_cluster-15816_41_12
hsa-miR-219a-2-3p tacaaagACAATTCt AGAAUUGU m7b Created HHFCT_109329_cluster-15816_41_12
hsa-miR-511-5p tacAAAGACAattct GUGUCUUU m7b Created HHFCT_109329_cluster-15816_41_12
hsa-miR-6830-3p tacAAAGACAattct UGUCUUUC m7a Created HHFCT_109329_cluster-15816_41_12

*By default, only target sites identified by TargetScan are displayed. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.

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