SomamiR DB 2.0
Somatic mutations altering microRNA-ceRNA interactions
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PolymiRTS Database

Prediction criteria: TargetScan sites only     All 6mer or longer seed matches

Transcript ID: hsa_circ_0057114
Gene Symbol: RAPGEF4
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Somatic mutations that impact miRNA target sites



Mutation Mutation ID Sample Name Cancer Type
chr2:g.172801886C>T COSN9866772 C0066T [kidney][NS][other][neoplasm]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-4417 ctctaAGCCCACtgc GGUGGGCU m7b Disrupted HPKMA_8433_G9752.1_173666634
hsa-miR-5009-5p ctctAAGTCCActgc UUGGACUU m7b Created HPKMA_8433_G9752.1_173666634
hsa-miR-8058 ctctAAGTCCActgc CUGGACUU m7b Created HPKMA_8433_G9752.1_173666634
hsa-miR-194-3p ctctaagCCCACTGc CCAGUGGG m7b Disrupted HPKMA_8433_G9752.1_173666634
hsa-miR-27a-5p ctcTAAGCCCactgc AGGGCUUA m7b Disrupted HPKMA_8433_G9752.1_173666634

*By default, only target sites identified by TargetScan are displayed. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.

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