SomamiR DB 2.0
Somatic mutations altering microRNA-ceRNA interactions
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PolymiRTS Database
Prediction criteria: TargetScan sites only     All 6mer or longer seed matches
Transcript ID: NM_002886
Gene Symbol: RAP2B
Browse Associations

Somatic mutations that impact miRNA target sites


Mutation Mutation ID Sample Name Cancer Type
chr3:g.153164184T>TT COSN5275695 TCGA-G4-6309-01 [large_intestine][colon][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-3613-3p gtttttgTTTTTTGg ACAAAAAA m7b Disrupted HHFKP_104536_uc003ezr.1_9_437
Mutation Mutation ID Sample Name Cancer Type
chr3:g.153164183G>GT COSN5275694 TCGA-G4-6309-01 [large_intestine][colon][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
No TargetScan sites are altered. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.


Mutation Mutation ID Sample Name Cancer Type
chr3:g.153163115C>G COSM3726424 345973 [lung][NS][carcinoma][squamous_cell_carcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-3179 agctgCCCCTTCatg AGAAGGGG m7b Disrupted HHFCT_112428_uc003ezr.1_2_144
hsa-miR-4688 agcTGCCCCTtcatg UAGGGGCA m7b Disrupted HHFCT_112428_uc003ezr.1_2_144
hsa-miR-486-3p agCTGCCCCttcatg CGGGGCAG m7b (m7b->m6b) HHFCT_112428_uc003ezr.1_2_144
hsa-miR-6743-5p agcTGCCCCTTcatg AAGGGGCA m8a Disrupted HHFCT_112428_uc003ezr.1_2_144
hsa-miR-6820-5p agCTGCCGCttcatg UGCGGCAG m7b (m6b->m7b) HHFCT_112428_uc003ezr.1_2_144
hsa-miR-6864-5p agctgcCCCTTCAtg UUGAAGGG m7b Disrupted HHFCT_112428_uc003ezr.1_2_144
hsa-miR-7515 agctgcCCCTTCatg AGAAGGGA m6b Disrupted HHFCT_112428_uc003ezr.1_2_144

Mutation Mutation ID Sample Name Cancer Type
chr3:g.153162988C>T COSM1484758 TCGA-GI-A2C8-01 [breast][NS][carcinoma][NS]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-3663-5p gcggGACCAGatcat GCUGGUCU m6b Disrupted HPRO6_54178_G64370.1_152880773
hsa-miR-4281 gCGGGACCagatcat GGGUCCCG m7b Disrupted HPRO6_54178_G64370.1_152880773
hsa-miR-554 gcgGGACTAGatcat GCUAGUCC m7b Created HPRO6_54178_G64370.1_152880773
hsa-miR-5588-3p gcGGGACTagatcat AAGUCCCA m6b Created HPRO6_54178_G64370.1_152880773
hsa-miR-7152-3p gcgGGACCAGAtcat UCUGGUCC m8a Disrupted HPRO6_54178_G64370.1_152880773

Mutation Mutation ID Sample Name Cancer Type
chr3:g.153162982C>T COSM3408364 TCGA-06-0151-01 [central_nervous_system][brain][glioma][astrocytoma_Grade_IV]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-188-3p gcccaTGTGGGAcca CUCCCACA m7b Created HPRO6_54178_G64370.1_152880773
hsa-miR-4281 gcccatgCGGGACCa GGGUCCCG m7b Disrupted HPRO6_54178_G64370.1_152880773
hsa-miR-4433a-5p gcccatGTGGGACca CGUCCCAC m7b Created HPRO6_54178_G64370.1_152880773
hsa-miR-4717-3p gcCCATGTGggacca ACACAUGG m7b (m6b->m7b) HPRO6_54178_G64370.1_152880773

Mutation Mutation ID Sample Name Cancer Type
chr3:g.153162976C>A COSM4391867 TCGA-HC-A6HY-01 [prostate][NS][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-27a-5p catcAAGCCCatgcg AGGGCUUA m6b Disrupted HPRO6_54178_G64370.1_152880773

Mutation Mutation ID Sample Name Cancer Type
chr3:g.153162707A>C COSM21665 NCI-H2126 [lung][NS][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-1255b-2-3p gagtacaAAGTGGTg AACCACUU m7b Disrupted HPSEF_15372_G18514.1_152880498
hsa-miR-892a gagtACACAGTGgtg CACUGUGU m8a Created HPSEF_15372_G18514.1_152880498

Mutation Mutation ID Sample Name Cancer Type
chr3:g.153162537C>T COSN9136937 AOCS-170-1-8 [ovary][NS][other][neoplasm]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID

No TargetScan sites are altered. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.
*By default, only target sites identified by TargetScan are displayed. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.

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