SomamiR DB 2.0
Somatic mutations altering microRNA-ceRNA interactions
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PolymiRTS Database

Prediction criteria: TargetScan sites only     All 6mer or longer seed matches

Transcript ID: hsa_circ_0034615
Gene Symbol: RAD51
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Somatic mutations that impact miRNA target sites



Mutation Mutation ID Sample Name Cancer Type
chr15:g.40706279G>C COSM4753513 pfg089T [stomach][NS][carcinoma][mixed_intestinal_and_diffuse_adenocarcinoma-unclassifiable]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-99b-3p aGAGCTTGacaaact CAAGCUCG m7a Disrupted HHFCT_52233_cluster-7235_3_21
hsa-miR-127-5p agAGCTTCAcaaact CUGAAGCU m7b (m6b->m7b) HHFCT_52233_cluster-7235_3_21
hsa-miR-3611 agagCTTCACAAact UUGUGAAG m8a Created HHFCT_52233_cluster-7235_3_21
hsa-miR-3928-5p aGAGCTTCAcaaact UGAAGCUC m8a (m7a->m8a) HHFCT_52233_cluster-7235_3_21
hsa-miR-6796-3p AGAGCTTCacaaact GAAGCUCU m8a Created HHFCT_52233_cluster-7235_3_21
hsa-miR-6806-3p aGAGCTTCAcaaact UGAAGCUC m8a (m7a->m8a) HHFCT_52233_cluster-7235_3_21
hsa-miR-99a-3p aGAGCTTGacaaact CAAGCUCG m7a Disrupted HHFCT_52233_cluster-7235_3_21

Mutation Mutation ID Sample Name Cancer Type
chr15:g.40706272A>T COSM4940196 TCGA-MI-A75G-01 [liver][NS][carcinoma][hepatocellular_carcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-6796-3p gctccaaAGAGCTTg GAAGCUCU m7b Disrupted HHFCT_52233_cluster-7235_3_21

Mutation Mutation ID Sample Name Cancer Type
chr15:g.40706209C>A COSM1478082 TCGA-BH-A1FN-01 [breast][NS][carcinoma][NS]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-140-5p tgggtttAACCACTg CAGUGGUU m7b Created HPRO6_26486_G31205.1_40998418

*By default, only target sites identified by TargetScan are displayed. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.

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