SomamiR DB 2.0
Somatic mutations altering microRNA-ceRNA interactions
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PolymiRTS Database
Prediction criteria: TargetScan sites only     All 6mer or longer seed matches
Transcript ID: hsa_circ_0046805
Gene Symbol: PTPRM
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Browse Pathways

Somatic mutations that impact miRNA target sites


Mutation Mutation ID Sample Name Cancer Type
chr18:g.8069754G>A COSM4073546 TCGA-CD-5800-01 [stomach][NS][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-135a-5p ccgctggAAGCCATt UAUGGCUU m7b Created HHFCT_71764_uc010dkv.1_103_13
hsa-miR-135b-5p ccgctggAAGCCATt UAUGGCUU m7b Created HHFCT_71764_uc010dkv.1_103_13
hsa-miR-2115-5p ccgcTGGAAGCcatt AGCUUCCA m7b Created HHFCT_71764_uc010dkv.1_103_13
hsa-miR-7977 ccGCTGGGAgccatt UUCCCAGC m7b (m7b->m6b) HHFCT_71764_uc010dkv.1_103_13
hsa-miR-135a-5p ccgctggAAGCCATt UAUGGCUU m7b Created HHFKP_67261_uc010dkv.1_62_24
hsa-miR-135b-5p ccgctggAAGCCATt UAUGGCUU m7b Created HHFKP_67261_uc010dkv.1_62_24
hsa-miR-2115-5p ccgcTGGAAGCcatt AGCUUCCA m7b Created HHFKP_67261_uc010dkv.1_62_24
hsa-miR-7977 ccGCTGGGAgccatt UUCCCAGC m7b (m7b->m6b) HHFKP_67261_uc010dkv.1_62_24
hsa-miR-135a-5p ccgctggAAGCCATt UAUGGCUU m7b Created HHFCT_71764_uc010dkv.1_103_13
hsa-miR-135b-5p ccgctggAAGCCATt UAUGGCUU m7b Created HHFCT_71764_uc010dkv.1_103_13
hsa-miR-2115-5p ccgcTGGAAGCcatt AGCUUCCA m7b Created HHFCT_71764_uc010dkv.1_103_13
hsa-miR-7977 ccGCTGGGAgccatt UUCCCAGC m7b (m7b->m6b) HHFCT_71764_uc010dkv.1_103_13
hsa-miR-135a-5p ccgctggAAGCCATt UAUGGCUU m7b Created HHFKP_67261_uc010dkv.1_62_24
hsa-miR-135b-5p ccgctggAAGCCATt UAUGGCUU m7b Created HHFKP_67261_uc010dkv.1_62_24
hsa-miR-2115-5p ccgcTGGAAGCcatt AGCUUCCA m7b Created HHFKP_67261_uc010dkv.1_62_24
hsa-miR-7977 ccGCTGGGAgccatt UUCCCAGC m7b (m7b->m6b) HHFKP_67261_uc010dkv.1_62_24

Mutation Mutation ID Sample Name Cancer Type
chr18:g.8069748C>T COSM3891375 TCGA-FW-A3R5-06 [skin][NS][malignant_melanoma][NS]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-4530 cactatCTGCTGGGa CCCAGCAG m8a Created HHFCT_71764_uc010dkv.1_103_13
hsa-miR-922 cactaTCTGCTGgga GCAGCAGA m7b Created HHFCT_71764_uc010dkv.1_103_13
hsa-miR-4530 cactatCTGCTGGGa CCCAGCAG m8a Created HHFKP_67261_uc010dkv.1_62_24
hsa-miR-922 cactaTCTGCTGgga GCAGCAGA m7b Created HHFKP_67261_uc010dkv.1_62_24
hsa-miR-4530 cactatCTGCTGGGa CCCAGCAG m8a Created HHFCT_71764_uc010dkv.1_103_13
hsa-miR-922 cactaTCTGCTGgga GCAGCAGA m7b Created HHFCT_71764_uc010dkv.1_103_13
hsa-miR-4530 cactatCTGCTGGGa CCCAGCAG m8a Created HHFKP_67261_uc010dkv.1_62_24
hsa-miR-922 cactaTCTGCTGgga GCAGCAGA m7b Created HHFKP_67261_uc010dkv.1_62_24

Mutation Mutation ID Sample Name Cancer Type
chr18:g.8069733C>T COSM3422348 P100 [large_intestine][NS][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-192-3p caaatcTTGGCAaat CUGCCAAU m6b Created HHFKP_67261_uc010dkv.1_62_24
hsa-miR-4480 caaatCTTGGCaaat AGCCAAGU m6b Created HHFKP_67261_uc010dkv.1_62_24
hsa-miR-4776-3p caaatctTGGCAAat CUUGCCAU m6b Created HHFKP_67261_uc010dkv.1_62_24
hsa-miR-192-3p caaatcTTGGCAaat CUGCCAAU m6b Created HHFKP_67261_uc010dkv.1_62_24
hsa-miR-4480 caaatCTTGGCaaat AGCCAAGU m6b Created HHFKP_67261_uc010dkv.1_62_24
hsa-miR-4776-3p caaatctTGGCAAat CUUGCCAU m6b Created HHFKP_67261_uc010dkv.1_62_24

*By default, only target sites identified by TargetScan are displayed. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.

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