SomamiR DB 2.0
Somatic mutations altering microRNA-ceRNA interactions
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PolymiRTS Database
Prediction criteria: TargetScan sites only     All 6mer or longer seed matches
Transcript ID: hsa_circ_0046804
Gene Symbol: PTPRM
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Somatic mutations that impact miRNA target sites


Mutation Mutation ID Sample Name Cancer Type
chr18:g.8003102G>A COSN7352889 8032817 [pancreas][NS][carcinoma][NS]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-4317 tttGGCAATGTcccc ACAUUGCC m8a Created HHFKP_67259_uc010dkv.1_60_8
hsa-miR-6890-3p tttGGCAGTGtcccc CCACUGCC m7b Disrupted HHFKP_67259_uc010dkv.1_60_8

Mutation Mutation ID Sample Name Cancer Type
chr18:g.7955363G>A COSM4520892 CSCC-49-T [skin][head_neck][carcinoma][squamous_cell_carcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-4252 aggggagAGTGGCac GGCCACUG m6b Created HHFKP_67254_uc010dkv.1_55_24
hsa-miR-4639-3p agggGAGAGTGgcac UCACUCUC m7b Created HHFKP_67254_uc010dkv.1_55_24
hsa-miR-4715-3p aggggagGGTGGCAc GUGCCACC m7b Disrupted HHFKP_67254_uc010dkv.1_55_24
hsa-miR-6777-3p aggggAGAGTGGcac UCCACUCU m7b Created HHFKP_67254_uc010dkv.1_55_24
hsa-miR-6865-3p agggGAGGGTGgcac ACACCCUC m7b Disrupted HHFKP_67254_uc010dkv.1_55_24
hsa-miR-4252 aggggagAGTGGCac GGCCACUG m6b Created HHFKP_67254_uc010dkv.1_55_24
hsa-miR-4639-3p agggGAGAGTGgcac UCACUCUC m7b Created HHFKP_67254_uc010dkv.1_55_24
hsa-miR-4715-3p aggggagGGTGGCAc GUGCCACC m7b Disrupted HHFKP_67254_uc010dkv.1_55_24
hsa-miR-6777-3p aggggAGAGTGGcac UCCACUCU m7b Created HHFKP_67254_uc010dkv.1_55_24
hsa-miR-6865-3p agggGAGGGTGgcac ACACCCUC m7b Disrupted HHFKP_67254_uc010dkv.1_55_24

Mutation Mutation ID Sample Name Cancer Type
chr18:g.7955351A>G COSM1725225 106T [liver][NS][carcinoma][hepatocellular_carcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-1538 cctgaCCGGGCCagg CGGCCCGG m7b Created HHFKP_67254_uc010dkv.1_55_24
hsa-miR-3176 cctgaccAGGCCAGg ACUGGCCU m7b Disrupted HHFKP_67254_uc010dkv.1_55_24
hsa-miR-3922-3p cctgaccAGGCCAGg UCUGGCCU m7b Disrupted HHFKP_67254_uc010dkv.1_55_24
hsa-miR-4745-3p cctgaCCGGGCCAgg UGGCCCGG m8a Created HHFKP_67254_uc010dkv.1_55_24
hsa-miR-6735-3p cctgacCAGGCCagg AGGCCUGU m6b Disrupted HHFKP_67254_uc010dkv.1_55_24

Mutation Mutation ID Sample Name Cancer Type
chr18:g.7955346T>A COSM1263498 ESO-1059 [oesophagus][NS][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-3663-5p gtgctccAGACCAGg GCUGGUCU m7b Created HHFKP_67254_uc010dkv.1_55_24
hsa-miR-4433a-3p gtgCTCCTGaccagg ACAGGAGU m6b Disrupted HHFKP_67254_uc010dkv.1_55_24
hsa-miR-4459 gtgCTCCTGaccagg CCAGGAGG m6b Disrupted HHFKP_67254_uc010dkv.1_55_24
hsa-miR-4768-3p gtgCTCCTGaccagg CCAGGAGA m6b Disrupted HHFKP_67254_uc010dkv.1_55_24
hsa-miR-516b-5p gtgCTCCAGAccagg AUCUGGAG m7b Created HHFKP_67254_uc010dkv.1_55_24
hsa-miR-6503-5p gtgctcCAGACCagg AGGUCUGC m6b Created HHFKP_67254_uc010dkv.1_55_24

*By default, only target sites identified by TargetScan are displayed. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.

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