SomamiR DB 2.0
Somatic mutations altering microRNA-ceRNA interactions
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PolymiRTS Database
Prediction criteria: TargetScan sites only     All 6mer or longer seed matches
Transcript ID: hsa_circ_0046801
Gene Symbol: PTPRM
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Somatic mutations that impact miRNA target sites


Mutation Mutation ID Sample Name Cancer Type
chr18:g.7888352G>T COSM257834 TCGA-AG-3892-01 [large_intestine][rectum][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-548a-5p gccattaTTACTTTc AAAAGUAA m7b Created HHFCT_71743_uc010dkv.1_81_133
hsa-miR-548ab gccattaTTACTTTc AAAAGUAA m7b Created HHFCT_71743_uc010dkv.1_81_133
hsa-miR-548ad-5p gccattaTTACTTTc AAAAGUAA m7b Created HHFCT_71743_uc010dkv.1_81_133
hsa-miR-548ae-5p gccattaTTACTTTc AAAAGUAA m7b Created HHFCT_71743_uc010dkv.1_81_133
hsa-miR-548ak gccattaTTACTTTc AAAAGUAA m7b Created HHFCT_71743_uc010dkv.1_81_133
hsa-miR-548am-5p gccattaTTACTTTc AAAAGUAA m7b Created HHFCT_71743_uc010dkv.1_81_133
hsa-miR-548ap-5p gccattaTTACTTTc AAAAGUAA m7b Created HHFCT_71743_uc010dkv.1_81_133
hsa-miR-548aq-5p gccattaTTACTTTc GAAAGUAA m7b Created HHFCT_71743_uc010dkv.1_81_133
hsa-miR-548ar-5p gccattaTTACTTTc AAAAGUAA m7b Created HHFCT_71743_uc010dkv.1_81_133
hsa-miR-548as-5p gccattaTTACTTTc AAAAGUAA m7b Created HHFCT_71743_uc010dkv.1_81_133
hsa-miR-548au-5p gccattaTTACTTTc AAAAGUAA m7b Created HHFCT_71743_uc010dkv.1_81_133
hsa-miR-548av-5p gccattaGTACTTTc AAAAGUAC m7b Disrupted HHFCT_71743_uc010dkv.1_81_133
hsa-miR-548ay-5p gccattaTTACTTTc AAAAGUAA m7b Created HHFCT_71743_uc010dkv.1_81_133
hsa-miR-548b-5p gccattaTTACTTTc AAAAGUAA m7b Created HHFCT_71743_uc010dkv.1_81_133
hsa-miR-548bb-5p gccattaTTACTTTc AAAAGUAA m7b Created HHFCT_71743_uc010dkv.1_81_133
hsa-miR-548c-5p gccattaTTACTTTc AAAAGUAA m7b Created HHFCT_71743_uc010dkv.1_81_133
hsa-miR-548d-5p gccattaTTACTTTc AAAAGUAA m7b Created HHFCT_71743_uc010dkv.1_81_133
hsa-miR-548h-5p gccattaTTACTTTc AAAAGUAA m7b Created HHFCT_71743_uc010dkv.1_81_133
hsa-miR-548i gccattaTTACTTTc AAAAGUAA m7b Created HHFCT_71743_uc010dkv.1_81_133
hsa-miR-548j-5p gccattaTTACTTTc AAAAGUAA m7b Created HHFCT_71743_uc010dkv.1_81_133
hsa-miR-548k gccattaGTACTTTc AAAAGUAC m7b Disrupted HHFCT_71743_uc010dkv.1_81_133
hsa-miR-548o-5p gccattaTTACTTTc AAAAGUAA m7b Created HHFCT_71743_uc010dkv.1_81_133
hsa-miR-548w gccattaTTACTTTc AAAAGUAA m7b Created HHFCT_71743_uc010dkv.1_81_133
hsa-miR-548y gccattaTTACTTTc AAAAGUAA m7b Created HHFCT_71743_uc010dkv.1_81_133
hsa-miR-559 gccattaTTACTTTc UAAAGUAA m7b Created HHFCT_71743_uc010dkv.1_81_133
hsa-miR-8054 gccattaGTACTTTc GAAAGUAC m7b Disrupted HHFCT_71743_uc010dkv.1_81_133

Mutation Mutation ID Sample Name Cancer Type
chr18:g.7888346C>T COSM1641039 pfg001T [stomach][NS][adenocarcinoma][NS]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-4435 gaaCTGGCCATtagt AUGGCCAG m8a Disrupted HHFCT_71743_uc010dkv.1_81_133
hsa-miR-5197-5p gaactgGCCATTagt CAAUGGCA m6b Disrupted HHFCT_71743_uc010dkv.1_81_133

Mutation Mutation ID Sample Name Cancer Type
chr18:g.7888342C>T COSM4969104 SJHGG010_D [central_nervous_system][brain][glioma][astrocytoma_Grade_IV]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-148b-5p ggCAGAACTggccat AAGUUCUG m7b (m7b->m6b) HHFCT_71743_uc010dkv.1_81_133
hsa-miR-4277 ggcAGAACTGgccat GCAGUUCU m7b Disrupted HHFCT_71743_uc010dkv.1_81_133
hsa-miR-4435 ggcagaaCTGGCCAt AUGGCCAG m7b Disrupted HHFCT_71743_uc010dkv.1_81_133
hsa-miR-548s ggcagaaTTGGCCAt AUGGCCAA m7b Created HHFCT_71743_uc010dkv.1_81_133
hsa-miR-6874-3p ggCAGAACTGgccat CAGUUCUG m8a Disrupted HHFCT_71743_uc010dkv.1_81_133
hsa-miR-148b-5p ggCAGAACTggccat AAGUUCUG m7b (m7b->m6b) HHFCT_71743_uc010dkv.1_81_133
hsa-miR-4277 ggcAGAACTGgccat GCAGUUCU m7b Disrupted HHFCT_71743_uc010dkv.1_81_133
hsa-miR-4435 ggcagaaCTGGCCAt AUGGCCAG m7b Disrupted HHFCT_71743_uc010dkv.1_81_133
hsa-miR-548s ggcagaaTTGGCCAt AUGGCCAA m7b Created HHFCT_71743_uc010dkv.1_81_133
hsa-miR-6874-3p ggCAGAACTGgccat CAGUUCUG m8a Disrupted HHFCT_71743_uc010dkv.1_81_133

*By default, only target sites identified by TargetScan are displayed. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.

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