SomamiR DB 2.0
Somatic mutations altering microRNA-ceRNA interactions
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PolymiRTS Database
Prediction criteria: TargetScan sites only     All 6mer or longer seed matches
Transcript ID: NM_001105244
Gene Symbol: PTPRM
Browse Associations
Browse Pathways

Somatic mutations that impact miRNA target sites


Mutation Mutation ID Sample Name Cancer Type
chr18:g.8406147C>T COSM990194 TCGA-A5-A0VQ-01 [endometrium][NS][carcinoma][endometrioid_carcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-1297 tggaaTACTTGAAtt UUCAAGUA m8a Disrupted HHFKP_67288_uc010dkv.1_89_498
hsa-miR-26a-5p tggaaTACTTGAAtt UUCAAGUA m8a Disrupted HHFKP_67288_uc010dkv.1_89_498
hsa-miR-26b-5p tggaaTACTTGAAtt UUCAAGUA m8a Disrupted HHFKP_67288_uc010dkv.1_89_498
hsa-miR-3671 tggaaTATTTGAatt AUCAAAUA m7b Created HHFKP_67288_uc010dkv.1_89_498
hsa-miR-4465 tggaaTACTTGAatt CUCAAGUA m7b Disrupted HHFKP_67288_uc010dkv.1_89_498
hsa-miR-5697 tggaaTACTTGAatt UCAAGUAG m7a Disrupted HHFKP_67288_uc010dkv.1_89_498
hsa-miR-607 tggaatATTTGAAtt GUUCAAAU m7b Created HHFKP_67288_uc010dkv.1_89_498

Mutation Mutation ID Sample Name Cancer Type
chr18:g.8406137C>A COSM180061 TCGA-AA-3529-01 [large_intestine][colon][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-3918 gaggtGGCCCTGgaa ACAGGGCC m7b Disrupted HHFKP_67288_uc010dkv.1_89_498
hsa-miR-4685-5p gaggtgGCCCTGGaa CCCAGGGC m7b Disrupted HHFKP_67288_uc010dkv.1_89_498
hsa-miR-6837-5p gaggtgGCCCTGGaa ACCAGGGC m7b Disrupted HHFKP_67288_uc010dkv.1_89_498
hsa-miR-6895-5p gaggTGGCCCTGgaa CAGGGCCA m8a Disrupted HHFKP_67288_uc010dkv.1_89_498
hsa-miR-7113-5p gaggtggCCCTGGAa UCCAGGGA m7a Disrupted HHFKP_67288_uc010dkv.1_89_498
Mutation Mutation ID Sample Name Cancer Type
chr18:g.7734922TG>T COSN1759374 RK010_C01 [liver][NS][carcinoma][NS]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
No TargetScan sites are altered. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.


Mutation Mutation ID Sample Name Cancer Type
chr18:g.7722126T>C COSN1759351 RK054_C01 [liver][NS][carcinoma][NS]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-1296-5p ttactGCCCTAAaaa UUAGGGCC m7a Created HHFCT_71717_uc010dkv.1_55_171
hsa-miR-1303 ttactgCTCTAAAaa UUUAGAGA m7a Disrupted HHFCT_71717_uc010dkv.1_55_171
hsa-miR-2278 ttaCTGCTCTaaaaa GAGAGCAG m7b Disrupted HHFCT_71717_uc010dkv.1_55_171
hsa-miR-2909 ttactGCCCTAAaaa GUUAGGGC m7b Created HHFCT_71717_uc010dkv.1_55_171
hsa-miR-4436b-3p ttaCTGCCCTaaaaa CAGGGCAG m7b Created HHFCT_71717_uc010dkv.1_55_171
hsa-miR-4468 ttaCTGCTCTaaaaa AGAGCAGA m7a Disrupted HHFCT_71717_uc010dkv.1_55_171
hsa-miR-4632-5p ttaCTGCCCTaaaaa GAGGGCAG m7b Created HHFCT_71717_uc010dkv.1_55_171
hsa-miR-4761-3p ttacTGCCCTaaaaa GAGGGCAU m6b Created HHFCT_71717_uc010dkv.1_55_171
hsa-miR-6735-5p ttaCTGCCCTaaaaa CAGGGCAG m7b Created HHFCT_71717_uc010dkv.1_55_171
hsa-miR-6879-5p ttaCTGCCCTaaaaa CAGGGCAG m7b Created HHFCT_71717_uc010dkv.1_55_171
hsa-miR-7843-5p ttaCTGCCCTaaaaa GAGGGCAG m7b Created HHFCT_71717_uc010dkv.1_55_171

Mutation Mutation ID Sample Name Cancer Type
chr18:g.7709284T>A COSN9346368 AOCS-141-3-2 [ovary][NS][other][neoplasm]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-1270 tttaATCTCCAttta CUGGAGAU m7b Disrupted HPKTB_5098_G6429.1_7709283
hsa-miR-224-3p tttaatcACCATTTa AAAAUGGU m7b Created HPKTB_5098_G6429.1_7709283
hsa-miR-4694-3p tttaatcTCCATTTa CAAAUGGA m7b Disrupted HPKTB_5098_G6429.1_7709283
hsa-miR-522-3p tttaatcACCATTTa AAAAUGGU m7b Created HPKTB_5098_G6429.1_7709283
hsa-miR-620 tttaATCTCCATtta AUGGAGAU m8a Disrupted HPKTB_5098_G6429.1_7709283
hsa-miR-1270 tttaATCTCCAttta CUGGAGAU m7b Disrupted HPRO6_36454_G43149.1_7709273
hsa-miR-224-3p tttaatcACCATTTa AAAAUGGU m7b Created HPRO6_36454_G43149.1_7709273
hsa-miR-4694-3p tttaatcTCCATTTa CAAAUGGA m7b Disrupted HPRO6_36454_G43149.1_7709273
hsa-miR-522-3p tttaatcACCATTTa AAAAUGGU m7b Created HPRO6_36454_G43149.1_7709273
hsa-miR-620 tttaATCTCCATtta AUGGAGAU m8a Disrupted HPRO6_36454_G43149.1_7709273
Mutation Mutation ID Sample Name Cancer Type
chr18:g.7666602T>G COSN4966249 SS6003113 [oesophagus][NS][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
No TargetScan sites are altered. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.


Mutation Mutation ID Sample Name Cancer Type
chr18:g.7630508G>A COSN7352171 8016470 [pancreas][NS][carcinoma][NS]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-1236-3p gttatGAAGAGGagc CCUCUUCC m7a Created HHFKP_67225_uc010dkv.1_26_9
hsa-miR-5193 gttatGAGGAGGAgc UCCUCCUC m8a Disrupted HHFKP_67225_uc010dkv.1_26_9
hsa-miR-6515-3p gttaTGAAGAGgagc UCUCUUCA m7b Created HHFKP_67225_uc010dkv.1_26_9
hsa-miR-660-3p gttatgAGGAGGagc ACCUCCUG m6b Disrupted HHFKP_67225_uc010dkv.1_26_9
hsa-miR-6881-3p gttatgAAGAGGAgc AUCCUCUU m7b Created HHFKP_67225_uc010dkv.1_26_9
hsa-miR-6891-3p gttATGAGGaggagc CCCUCAUC m6b Disrupted HHFKP_67225_uc010dkv.1_26_9
hsa-miR-877-3p gttatGAAGAGGAgc UCCUCUUC m8a Created HHFKP_67225_uc010dkv.1_26_9

Mutation Mutation ID Sample Name Cancer Type
chr18:g.7628722A>G COSN6136547 RK200_C01 [liver][NS][carcinoma][NS]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-1271-3p ccctgtCAGGCACTg AGUGCCUG m8a Disrupted HHFCT_71697_uc010dkv.1_33_8
hsa-miR-33b-3p ccctgtcAGGCACTg CAGUGCCU m7b Disrupted HHFCT_71697_uc010dkv.1_33_8
hsa-miR-3660 ccCTGTCAGgcactg ACUGACAG m7b (m7b->m6b) HHFCT_71697_uc010dkv.1_33_8
hsa-miR-371b-3p ccctgtcGGGCACTg AAGUGCCC m7b Created HHFCT_71697_uc010dkv.1_33_8
hsa-miR-4526 ccCTGTCAGgcactg GCUGACAG m7b (m7b->m6b) HHFCT_71697_uc010dkv.1_33_8
hsa-miR-515-3p ccctgtcAGGCACTg GAGUGCCU m7b Disrupted HHFCT_71697_uc010dkv.1_33_8
hsa-miR-519e-3p ccctgtcAGGCACTg AAGUGCCU m7b Disrupted HHFCT_71697_uc010dkv.1_33_8
hsa-miR-550a-3-5p ccctgtCAGGCACTg AGUGCCUG m8a Disrupted HHFCT_71697_uc010dkv.1_33_8
hsa-miR-550a-5p ccctgtCAGGCACTg AGUGCCUG m8a Disrupted HHFCT_71697_uc010dkv.1_33_8

Mutation Mutation ID Sample Name Cancer Type
chr18:g.7628701T>C COSN4776835 tumor_4160468 [haematopoietic_and_lymphoid_tissue][NS][lymphoid_neoplasm][NS]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-1231 cagCAGACAattgag GUGUCUGG m6b Created HHFCT_71697_uc010dkv.1_33_8
hsa-miR-346 caGCAGACAattgag UGUCUGCC m7a (m6a->m7a) HHFCT_71697_uc010dkv.1_33_8
hsa-miR-4275 cagcagaTAATTGag CCAAUUAC m6b Disrupted HHFCT_71697_uc010dkv.1_33_8
hsa-miR-4288 caGCAGACAAttgag UUGUCUGC m8a Created HHFCT_71697_uc010dkv.1_33_8
hsa-miR-4686 cAGCAGATAattgag UAUCUGCU m8a (m8a->m7a) HHFCT_71697_uc010dkv.1_33_8
hsa-miR-632 caGCAGACAattgag GUGUCUGC m7b (m6b->m7b) HHFCT_71697_uc010dkv.1_33_8
hsa-miR-6828-3p cAGCAGATaattgag AUCUGCUC m7a Disrupted HHFCT_71697_uc010dkv.1_33_8

Mutation Mutation ID Sample Name Cancer Type
chr18:g.7616277G>A COSN9345989 AOCS-167-13-9 [ovary][NS][other][neoplasm]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-377-5p tgcctCAACCTCctg AGAGGUUG m7b Created HHFKP_67215_uc010dkv.1_16_9
hsa-miR-3929 tgccTCAGCCTCctg GAGGCUGA m8a Disrupted HHFKP_67215_uc010dkv.1_16_9
hsa-miR-4419b tgccTCAGCCTCctg GAGGCUGA m8a Disrupted HHFKP_67215_uc010dkv.1_16_9
hsa-miR-4478 tgccTCAGCCTCctg GAGGCUGA m8a Disrupted HHFKP_67215_uc010dkv.1_16_9
hsa-miR-4649-3p tGCCTCAGcctcctg UCUGAGGC m7b Disrupted HHFKP_67215_uc010dkv.1_16_9
hsa-miR-4695-5p tgcctcaGCCTCCTg CAGGAGGC m7b Disrupted HHFKP_67215_uc010dkv.1_16_9
hsa-miR-485-5p tgcctCAGCCTCctg AGAGGCUG m7b Disrupted HHFKP_67215_uc010dkv.1_16_9
hsa-miR-6086 tgcctCAACCTCCtg GGAGGUUG m8a Created HHFKP_67215_uc010dkv.1_16_9
hsa-miR-6884-5p tgcctCAGCCTCctg AGAGGCUG m7b Disrupted HHFKP_67215_uc010dkv.1_16_9
hsa-miR-7160-5p tgCCTCAGCctcctg UGCUGAGG m7b (m7b->m6b) HHFKP_67215_uc010dkv.1_16_9

Mutation Mutation ID Sample Name Cancer Type
chr18:g.7573984C>T COSN15157142 LP6005690-DNA_C02 [oesophagus][NS][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-10b-3p ctGAATCTGcaaccc ACAGAUUC m7b (m6b->m7b) HHFCT_71668_uc010dkv.1_3_12
hsa-miR-1273h-3p ctgaaTCTGCAaccc CUGCAGAC m6b Created HHFCT_71668_uc010dkv.1_3_12
hsa-miR-3678-3p ctgaaTCTGCAaccc CUGCAGAG m6b Created HHFCT_71668_uc010dkv.1_3_12
hsa-miR-4754 ctgaaTCCGCAaccc AUGCGGAC m6b Disrupted HHFCT_71668_uc010dkv.1_3_12
hsa-miR-6850-5p ctgaaTCCGCAaccc GUGCGGAA m6b Disrupted HHFCT_71668_uc010dkv.1_3_12

*By default, only target sites identified by TargetScan are displayed. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.

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