SomamiR DB 2.0
Somatic mutations altering microRNA-ceRNA interactions
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PolymiRTS Database
Prediction criteria: TargetScan sites only     All 6mer or longer seed matches
Transcript ID: hsa_circ_0022102
Gene Symbol: PTPRJ
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Somatic mutations that impact miRNA target sites


Mutation Mutation ID Sample Name Cancer Type
chr11:g.48137091G>A COSM121682 HN_62532 [upper_aerodigestive_tract][head_neck][carcinoma][squamous_cell_carcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-299-3p ctCCCACATActcct UAUGUGGG m8a Created HHFKP_27729_cluster-3471_28_53
hsa-miR-4296 ctCCCACATactcct AUGUGGGC m7a (m6a->m7a) HHFKP_27729_cluster-3471_28_53
hsa-miR-4491 ctcCCACATactcct AAUGUGGA m6b Created HHFKP_27729_cluster-3471_28_53
hsa-miR-4657 ctcCCACATactcct AAUGUGGA m6b Created HHFKP_27729_cluster-3471_28_53

Mutation Mutation ID Sample Name Cancer Type
chr11:g.48137086C>T COSM1222648 587224 [large_intestine][colon][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-1233-5p cgcctCTCCCACgta AGUGGGAG m7b Disrupted HHFKP_27729_cluster-3471_28_53
hsa-miR-30c-1-3p cgccTCTCCCAcgta CUGGGAGA m7b Disrupted HHFKP_27729_cluster-3471_28_53
hsa-miR-30c-2-3p cgccTCTCCCAcgta CUGGGAGA m7b Disrupted HHFKP_27729_cluster-3471_28_53
hsa-miR-3190-3p cgcctCTTCCACgta UGUGGAAG m7b Created HHFKP_27729_cluster-3471_28_53
hsa-miR-6077 cgcCTCTTCCacgta GGGAAGAG m7b Created HHFKP_27729_cluster-3471_28_53
hsa-miR-6731-5p cgcCTCTCCCAcgta UGGGAGAG m8a Disrupted HHFKP_27729_cluster-3471_28_53
hsa-miR-6778-5p cgcctCTCCCACgta AGUGGGAG m7b Disrupted HHFKP_27729_cluster-3471_28_53
hsa-miR-6788-5p cgccTCTCCCAcgta CUGGGAGA m7b Disrupted HHFKP_27729_cluster-3471_28_53
hsa-miR-6878-5p cgccTCTCCCacgta AGGGAGAA m6b Disrupted HHFKP_27729_cluster-3471_28_53
hsa-miR-8085 cgcCTCTCCCAcgta UGGGAGAG m8a Disrupted HHFKP_27729_cluster-3471_28_53
hsa-miR-1233-5p cgcctCTCCCACgta AGUGGGAG m7b Disrupted HHFKP_27729_cluster-3471_28_53
hsa-miR-30c-1-3p cgccTCTCCCAcgta CUGGGAGA m7b Disrupted HHFKP_27729_cluster-3471_28_53
hsa-miR-30c-2-3p cgccTCTCCCAcgta CUGGGAGA m7b Disrupted HHFKP_27729_cluster-3471_28_53
hsa-miR-3190-3p cgcctCTTCCACgta UGUGGAAG m7b Created HHFKP_27729_cluster-3471_28_53
hsa-miR-6077 cgcCTCTTCCacgta GGGAAGAG m7b Created HHFKP_27729_cluster-3471_28_53
hsa-miR-6731-5p cgcCTCTCCCAcgta UGGGAGAG m8a Disrupted HHFKP_27729_cluster-3471_28_53
hsa-miR-6778-5p cgcctCTCCCACgta AGUGGGAG m7b Disrupted HHFKP_27729_cluster-3471_28_53
hsa-miR-6788-5p cgccTCTCCCAcgta CUGGGAGA m7b Disrupted HHFKP_27729_cluster-3471_28_53
hsa-miR-6878-5p cgccTCTCCCacgta AGGGAGAA m6b Disrupted HHFKP_27729_cluster-3471_28_53
hsa-miR-8085 cgcCTCTCCCAcgta UGGGAGAG m8a Disrupted HHFKP_27729_cluster-3471_28_53

Mutation Mutation ID Sample Name Cancer Type
chr11:g.48137084C>T COSM4474967 CSCC-27-T [skin][head_neck][carcinoma][squamous_cell_carcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-1233-5p gacgcctCTCCCACg AGUGGGAG m7b Disrupted HHFKP_27729_cluster-3471_28_53
hsa-miR-30c-1-3p gacgccTCTCCCAcg CUGGGAGA m7b Disrupted HHFKP_27729_cluster-3471_28_53
hsa-miR-30c-2-3p gacgccTCTCCCAcg CUGGGAGA m7b Disrupted HHFKP_27729_cluster-3471_28_53
hsa-miR-3153 gacgcCTTTCCCacg GGGGAAAG m7b Created HHFKP_27729_cluster-3471_28_53
hsa-miR-4484 gaCGCCTTTcccacg AAAAGGCG m7b (m6b->m7b) HHFKP_27729_cluster-3471_28_53
hsa-miR-4668-5p gacgccTTTCCCacg AGGGAAAA m6b Created HHFKP_27729_cluster-3471_28_53
hsa-miR-6731-5p gacgcCTCTCCCAcg UGGGAGAG m8a Disrupted HHFKP_27729_cluster-3471_28_53
hsa-miR-6733-5p gacgcCTTTCCCAcg UGGGAAAG m8a Created HHFKP_27729_cluster-3471_28_53
hsa-miR-6739-5p gacgcCTTTCCCAcg UGGGAAAG m8a Created HHFKP_27729_cluster-3471_28_53
hsa-miR-6778-5p gacgcctCTCCCACg AGUGGGAG m7b Disrupted HHFKP_27729_cluster-3471_28_53
hsa-miR-6788-5p gacgccTCTCCCAcg CUGGGAGA m7b Disrupted HHFKP_27729_cluster-3471_28_53
hsa-miR-6878-5p gacgccTCTCCCacg AGGGAGAA m6b Disrupted HHFKP_27729_cluster-3471_28_53
hsa-miR-8085 gacgcCTCTCCCAcg UGGGAGAG m8a Disrupted HHFKP_27729_cluster-3471_28_53
hsa-miR-1233-5p gacgcctCTCCCACg AGUGGGAG m7b Disrupted HHFKP_27729_cluster-3471_28_53
hsa-miR-30c-1-3p gacgccTCTCCCAcg CUGGGAGA m7b Disrupted HHFKP_27729_cluster-3471_28_53
hsa-miR-30c-2-3p gacgccTCTCCCAcg CUGGGAGA m7b Disrupted HHFKP_27729_cluster-3471_28_53
hsa-miR-3153 gacgcCTTTCCCacg GGGGAAAG m7b Created HHFKP_27729_cluster-3471_28_53
hsa-miR-4484 gaCGCCTTTcccacg AAAAGGCG m7b (m6b->m7b) HHFKP_27729_cluster-3471_28_53
hsa-miR-4668-5p gacgccTTTCCCacg AGGGAAAA m6b Created HHFKP_27729_cluster-3471_28_53
hsa-miR-6731-5p gacgcCTCTCCCAcg UGGGAGAG m8a Disrupted HHFKP_27729_cluster-3471_28_53
hsa-miR-6733-5p gacgcCTTTCCCAcg UGGGAAAG m8a Created HHFKP_27729_cluster-3471_28_53
hsa-miR-6739-5p gacgcCTTTCCCAcg UGGGAAAG m8a Created HHFKP_27729_cluster-3471_28_53
hsa-miR-6778-5p gacgcctCTCCCACg AGUGGGAG m7b Disrupted HHFKP_27729_cluster-3471_28_53
hsa-miR-6788-5p gacgccTCTCCCAcg CUGGGAGA m7b Disrupted HHFKP_27729_cluster-3471_28_53
hsa-miR-6878-5p gacgccTCTCCCacg AGGGAGAA m6b Disrupted HHFKP_27729_cluster-3471_28_53
hsa-miR-8085 gacgcCTCTCCCAcg UGGGAGAG m8a Disrupted HHFKP_27729_cluster-3471_28_53

*By default, only target sites identified by TargetScan are displayed. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.

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