SomamiR DB 2.0
Somatic mutations altering microRNA-ceRNA interactions
  Home Search Help Download  

PolymiRTS Database
Prediction criteria: TargetScan sites only     All 6mer or longer seed matches
Transcript ID: hsa_circ_0055495
Gene Symbol: PTCD3
Browse Associations

Somatic mutations that impact miRNA target sites


Mutation Mutation ID Sample Name Cancer Type
chr2:g.86137625A>C COSN1243772 HCC98T [liver][NS][carcinoma][NS]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-1285-5p aacTGAGATatacca GAUCUCAC m6b Disrupted HHKTA_13609_NM_017952|2199|2238|5.23542086726261|0.560311085835182
hsa-miR-6854-5p aaCTGAGCTatacca AAGCUCAG m7b (m6b->m7b) HHKTA_13609_NM_017952|2199|2238|5.23542086726261|0.560311085835182
hsa-miR-7705 aactGAGCTATacca AAUAGCUC m7b Created HHKTA_13609_NM_017952|2199|2238|5.23542086726261|0.560311085835182
hsa-miR-1285-5p aacTGAGATatacca GAUCUCAC m6b Disrupted HHKTA_13609_NM_017952|2199|2238|5.23542086726261|0.560311085835182
hsa-miR-6854-5p aaCTGAGCTatacca AAGCUCAG m7b (m6b->m7b) HHKTA_13609_NM_017952|2199|2238|5.23542086726261|0.560311085835182
hsa-miR-7705 aactGAGCTATacca AAUAGCUC m7b Created HHKTA_13609_NM_017952|2199|2238|5.23542086726261|0.560311085835182

*By default, only target sites identified by TargetScan are displayed. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.

Genome Browser