SomamiR DB 2.0
Somatic mutations altering microRNA-ceRNA interactions
  Home Search Help Download  

PolymiRTS Database
Prediction criteria: TargetScan sites only     All 6mer or longer seed matches
Transcript ID: hsa_circ_0055476
Gene Symbol: PTCD3
Browse Associations

Somatic mutations that impact miRNA target sites


Mutation Mutation ID Sample Name Cancer Type
chr2:g.86108380G>T COSM1023438 TCGA-AP-A0LM-01 [endometrium][NS][carcinoma][endometrioid_carcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-421 tctcaaaTGTTGAag AUCAACAG m6b Created HHFKP_82414_cluster-12982_3_28
hsa-miR-4714-3p tctcaaAGGTTGaag CCAACCUA m6b Disrupted HHFKP_82414_cluster-12982_3_28
hsa-miR-6782-3p tctCAAAGGTtgaag CACCUUUG m7b Disrupted HHFKP_82414_cluster-12982_3_28
hsa-miR-421 tctcaaaTGTTGAag AUCAACAG m6b Created HHHNA_13793_PTCD3|NM_017952|exon_CDS|-6.2909436384871|2.05057029902942
hsa-miR-4714-3p tctcaaAGGTTGaag CCAACCUA m6b Disrupted HHHNA_13793_PTCD3|NM_017952|exon_CDS|-6.2909436384871|2.05057029902942
hsa-miR-6782-3p tctCAAAGGTtgaag CACCUUUG m7b Disrupted HHHNA_13793_PTCD3|NM_017952|exon_CDS|-6.2909436384871|2.05057029902942
hsa-miR-421 tctcaaaTGTTGAag AUCAACAG m6b Created HHHSA_13793_PTCD3|NM_017952|exon_CDS|-6.2909436384871|2.05057029902942
hsa-miR-4714-3p tctcaaAGGTTGaag CCAACCUA m6b Disrupted HHHSA_13793_PTCD3|NM_017952|exon_CDS|-6.2909436384871|2.05057029902942
hsa-miR-6782-3p tctCAAAGGTtgaag CACCUUUG m7b Disrupted HHHSA_13793_PTCD3|NM_017952|exon_CDS|-6.2909436384871|2.05057029902942

Mutation Mutation ID Sample Name Cancer Type
chr2:g.86108369A>G COSM4619203 C32 [large_intestine][colon][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-296-3p tagtgCAACCCTCtc GAGGGUUG m8a Disrupted HHFKP_82414_cluster-12982_3_28
hsa-miR-4446-3p tagtgCAGCCCTctc CAGGGCUG m7b Created HHFKP_82414_cluster-12982_3_28
hsa-miR-4721 tagtgcAGCCCTCtc UGAGGGCU m7b Created HHFKP_82414_cluster-12982_3_28
hsa-miR-4793-3p tAGTGCAGccctctc UCUGCACU m7b Created HHFKP_82414_cluster-12982_3_28
hsa-miR-6829-5p tagtGCAGCCCtctc UGGGCUGC m7b Created HHFKP_82414_cluster-12982_3_28
hsa-miR-296-3p tagtgCAACCCTCtc GAGGGUUG m8a Disrupted HHHNA_13793_PTCD3|NM_017952|exon_CDS|-6.2909436384871|2.05057029902942
hsa-miR-4446-3p tagtgCAGCCCTctc CAGGGCUG m7b Created HHHNA_13793_PTCD3|NM_017952|exon_CDS|-6.2909436384871|2.05057029902942
hsa-miR-4721 tagtgcAGCCCTCtc UGAGGGCU m7b Created HHHNA_13793_PTCD3|NM_017952|exon_CDS|-6.2909436384871|2.05057029902942
hsa-miR-4793-3p tAGTGCAGccctctc UCUGCACU m7b Created HHHNA_13793_PTCD3|NM_017952|exon_CDS|-6.2909436384871|2.05057029902942
hsa-miR-6829-5p tagtGCAGCCCtctc UGGGCUGC m7b Created HHHNA_13793_PTCD3|NM_017952|exon_CDS|-6.2909436384871|2.05057029902942
hsa-miR-296-3p tagtgCAACCCTCtc GAGGGUUG m8a Disrupted HHHSA_13793_PTCD3|NM_017952|exon_CDS|-6.2909436384871|2.05057029902942
hsa-miR-4446-3p tagtgCAGCCCTctc CAGGGCUG m7b Created HHHSA_13793_PTCD3|NM_017952|exon_CDS|-6.2909436384871|2.05057029902942
hsa-miR-4721 tagtgcAGCCCTCtc UGAGGGCU m7b Created HHHSA_13793_PTCD3|NM_017952|exon_CDS|-6.2909436384871|2.05057029902942
hsa-miR-4793-3p tAGTGCAGccctctc UCUGCACU m7b Created HHHSA_13793_PTCD3|NM_017952|exon_CDS|-6.2909436384871|2.05057029902942
hsa-miR-6829-5p tagtGCAGCCCtctc UGGGCUGC m7b Created HHHSA_13793_PTCD3|NM_017952|exon_CDS|-6.2909436384871|2.05057029902942

Mutation Mutation ID Sample Name Cancer Type
chr2:g.86108355A>G COSM4607208 2293770 [adrenal_gland][adrenal_gland][adrenal_cortical_carcinoma][functioning]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-3163 agATTTTATtctggt UAUAAAAU m7b (m7b->m6b) HHFKP_82414_cluster-12982_3_28
hsa-miR-589-3p agatttTGTTCTGgt UCAGAACA m7b Created HHFKP_82414_cluster-12982_3_28
hsa-miR-8063 aGATTTTGttctggt UCAAAAUC m7b Created HHFKP_82414_cluster-12982_3_28

Mutation Mutation ID Sample Name Cancer Type
chr2:g.86108354T>C COSM2822914 Gp5D [large_intestine][NS][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-3163 cagATTTTATtctgg UAUAAAAU m7b Disrupted HHFKP_82414_cluster-12982_3_28
hsa-miR-4668-3p caGATTTTattctgg GAAAAUCC m6b Disrupted HHFKP_82414_cluster-12982_3_28

*By default, only target sites identified by TargetScan are displayed. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.

Genome Browser