SomamiR DB 2.0
Somatic mutations altering microRNA-ceRNA interactions
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PolymiRTS Database

Prediction criteria: TargetScan sites only     All 6mer or longer seed matches

Transcript ID: NM_017952
Gene Symbol: PTCD3
Browse Associations

Somatic mutations that impact miRNA target sites



Mutation Mutation ID Sample Name Cancer Type
chr2:g.86106332G>A COSM1307060 TCGA-DK-A1AC-01 [urinary_tract][bladder][carcinoma][NS]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-3941 ttTGTGTAAacaggc UUACACAC m7a (m6a->m7a) HHFKP_82413_cluster-12982_1_153
hsa-miR-4731-3p tTTGTGTGaacaggc CACACAAG m7a Disrupted HHFKP_82413_cluster-12982_1_153
hsa-miR-4672 ttTGTGTAAacaggc UUACACAG m7a (m6a->m7a) HHFKP_82413_cluster-12982_1_153
hsa-miR-466 ttTGTGTAaacaggc AUACACAU m6b Created HHFKP_82413_cluster-12982_1_153
hsa-miR-377-3p ttTGTGTGAacaggc AUCACACA m7b (m7b->m6b) HHFKP_82413_cluster-12982_1_153
hsa-miR-1266-3p tttgtgtGAACAGGc CCCUGUUC m7b Disrupted HHFKP_82413_cluster-12982_1_153

*By default, only target sites identified by TargetScan are displayed. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.

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