SomamiR DB 2.0
Somatic mutations altering microRNA-ceRNA interactions
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PolymiRTS Database
Prediction criteria: TargetScan sites only     All 6mer or longer seed matches
Transcript ID: NM_001079880
Gene Symbol: PRKD2
Browse Associations

Somatic mutations that impact miRNA target sites


Mutation Mutation ID Sample Name Cancer Type
chr19:g.46716320G>T COSM712226 TCGA-22-5477-01 [lung][NS][carcinoma][squamous_cell_carcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-1538 CCGGGCCGgggtctc CGGCCCGG m8a Disrupted HHHNA_12677_PRKD2|NM_001079880|exon_utr5|-3.91015746034921|1.63667562424729
hsa-miR-4707-5p ccggGCCGGGGtctc GCCCCGGC m7b Disrupted HHHNA_12677_PRKD2|NM_001079880|exon_utr5|-3.91015746034921|1.63667562424729
hsa-miR-4747-3p cCGGGCCTgggtctc AAGGCCCG m7b Created HHHNA_12677_PRKD2|NM_001079880|exon_utr5|-3.91015746034921|1.63667562424729
hsa-miR-1538 CCGGGCCGgggtctc CGGCCCGG m8a Disrupted HHHSA_12677_PRKD2|NM_001079880|exon_utr5|-3.91015746034921|1.63667562424729
hsa-miR-4707-5p ccggGCCGGGGtctc GCCCCGGC m7b Disrupted HHHSA_12677_PRKD2|NM_001079880|exon_utr5|-3.91015746034921|1.63667562424729
hsa-miR-4747-3p cCGGGCCTgggtctc AAGGCCCG m7b Created HHHSA_12677_PRKD2|NM_001079880|exon_utr5|-3.91015746034921|1.63667562424729

Mutation Mutation ID Sample Name Cancer Type
chr19:g.46716313C>T COSM3105652 KM12 [large_intestine][NS][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-1253 ggggTCTTCTCcgcc AGAGAAGA m7b Created HHHNA_12677_PRKD2|NM_001079880|exon_utr5|-3.91015746034921|1.63667562424729
hsa-miR-3150b-3p ggggTCTCCTCcgcc UGAGGAGA m7b Disrupted HHHNA_12677_PRKD2|NM_001079880|exon_utr5|-3.91015746034921|1.63667562424729
hsa-miR-3667-5p gGGGTCTTctccgcc AAAGACCC m7b Created HHHNA_12677_PRKD2|NM_001079880|exon_utr5|-3.91015746034921|1.63667562424729
hsa-miR-4434 ggggtCTTCTCCgcc AGGAGAAG m7b Created HHHNA_12677_PRKD2|NM_001079880|exon_utr5|-3.91015746034921|1.63667562424729
hsa-miR-4516 ggggtCTTCTCCgcc GGGAGAAG m7b Created HHHNA_12677_PRKD2|NM_001079880|exon_utr5|-3.91015746034921|1.63667562424729
hsa-miR-4784 ggggTCTCCTCcgcc UGAGGAGA m7b Disrupted HHHNA_12677_PRKD2|NM_001079880|exon_utr5|-3.91015746034921|1.63667562424729
hsa-miR-5703 ggggtCTTCTCCgcc AGGAGAAG m7b Created HHHNA_12677_PRKD2|NM_001079880|exon_utr5|-3.91015746034921|1.63667562424729
hsa-miR-658 ggggtctCCTCCGCc GGCGGAGG m7b Disrupted HHHNA_12677_PRKD2|NM_001079880|exon_utr5|-3.91015746034921|1.63667562424729
hsa-miR-765 ggggtCTCCTCCgcc UGGAGGAG m7b Disrupted HHHNA_12677_PRKD2|NM_001079880|exon_utr5|-3.91015746034921|1.63667562424729
hsa-miR-1253 ggggTCTTCTCcgcc AGAGAAGA m7b Created HHHSA_12677_PRKD2|NM_001079880|exon_utr5|-3.91015746034921|1.63667562424729
hsa-miR-3150b-3p ggggTCTCCTCcgcc UGAGGAGA m7b Disrupted HHHSA_12677_PRKD2|NM_001079880|exon_utr5|-3.91015746034921|1.63667562424729
hsa-miR-3667-5p gGGGTCTTctccgcc AAAGACCC m7b Created HHHSA_12677_PRKD2|NM_001079880|exon_utr5|-3.91015746034921|1.63667562424729
hsa-miR-4434 ggggtCTTCTCCgcc AGGAGAAG m7b Created HHHSA_12677_PRKD2|NM_001079880|exon_utr5|-3.91015746034921|1.63667562424729
hsa-miR-4516 ggggtCTTCTCCgcc GGGAGAAG m7b Created HHHSA_12677_PRKD2|NM_001079880|exon_utr5|-3.91015746034921|1.63667562424729
hsa-miR-4784 ggggTCTCCTCcgcc UGAGGAGA m7b Disrupted HHHSA_12677_PRKD2|NM_001079880|exon_utr5|-3.91015746034921|1.63667562424729
hsa-miR-5703 ggggtCTTCTCCgcc AGGAGAAG m7b Created HHHSA_12677_PRKD2|NM_001079880|exon_utr5|-3.91015746034921|1.63667562424729
hsa-miR-658 ggggtctCCTCCGCc GGCGGAGG m7b Disrupted HHHSA_12677_PRKD2|NM_001079880|exon_utr5|-3.91015746034921|1.63667562424729
hsa-miR-765 ggggtCTCCTCCgcc UGGAGGAG m7b Disrupted HHHSA_12677_PRKD2|NM_001079880|exon_utr5|-3.91015746034921|1.63667562424729

Mutation Mutation ID Sample Name Cancer Type
chr19:g.46716312C>T COSM3536196 TCGA-EE-A2MT-06 [skin][NS][malignant_melanoma][NS]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-25-5p gggtctcCTCCGCCc AGGCGGAG m7b Disrupted HHHNA_12677_PRKD2|NM_001079880|exon_utr5|-3.91015746034921|1.63667562424729
hsa-miR-3150b-3p gggTCTCCTCcgccc UGAGGAGA m7b Disrupted HHHNA_12677_PRKD2|NM_001079880|exon_utr5|-3.91015746034921|1.63667562424729
hsa-miR-4784 gggTCTCCTCcgccc UGAGGAGA m7b Disrupted HHHNA_12677_PRKD2|NM_001079880|exon_utr5|-3.91015746034921|1.63667562424729
hsa-miR-6077 gggtCTCTTCCgccc GGGAAGAG m7b Created HHHNA_12677_PRKD2|NM_001079880|exon_utr5|-3.91015746034921|1.63667562424729
hsa-miR-658 gggtctCCTCCGCCc GGCGGAGG m8a Disrupted HHHNA_12677_PRKD2|NM_001079880|exon_utr5|-3.91015746034921|1.63667562424729
hsa-miR-765 gggtCTCCTCCgccc UGGAGGAG m7b Disrupted HHHNA_12677_PRKD2|NM_001079880|exon_utr5|-3.91015746034921|1.63667562424729
hsa-miR-25-5p gggtctcCTCCGCCc AGGCGGAG m7b Disrupted HHHSA_12677_PRKD2|NM_001079880|exon_utr5|-3.91015746034921|1.63667562424729
hsa-miR-3150b-3p gggTCTCCTCcgccc UGAGGAGA m7b Disrupted HHHSA_12677_PRKD2|NM_001079880|exon_utr5|-3.91015746034921|1.63667562424729
hsa-miR-4784 gggTCTCCTCcgccc UGAGGAGA m7b Disrupted HHHSA_12677_PRKD2|NM_001079880|exon_utr5|-3.91015746034921|1.63667562424729
hsa-miR-6077 gggtCTCTTCCgccc GGGAAGAG m7b Created HHHSA_12677_PRKD2|NM_001079880|exon_utr5|-3.91015746034921|1.63667562424729
hsa-miR-658 gggtctCCTCCGCCc GGCGGAGG m8a Disrupted HHHSA_12677_PRKD2|NM_001079880|exon_utr5|-3.91015746034921|1.63667562424729
hsa-miR-765 gggtCTCCTCCgccc UGGAGGAG m7b Disrupted HHHSA_12677_PRKD2|NM_001079880|exon_utr5|-3.91015746034921|1.63667562424729

Mutation Mutation ID Sample Name Cancer Type
chr19:g.46716301G>CG COSM297453 TCGA-AA-3975-01 [large_intestine][colon][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-328-5p GCCCCCCCggcggcct GGGGGGGC m8a Created HHHNA_12677_PRKD2|NM_001079880|exon_utr5|-3.91015746034921|1.63667562424729
hsa-miR-328-5p GCCCCCCCggcggcct GGGGGGGC m8a Created HHHSA_12677_PRKD2|NM_001079880|exon_utr5|-3.91015746034921|1.63667562424729

Mutation Mutation ID Sample Name Cancer Type
chr19:g.46716289C>T COSM4793510 CHC313T [liver][NS][carcinoma][hepatocellular_carcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-1184 cctagaGCTGCAGtc CCUGCAGC m7b Disrupted HHHNA_12677_PRKD2|NM_001079880|exon_utr5|-3.91015746034921|1.63667562424729
hsa-miR-1301-3p cctagAGCTGCAgtc UUGCAGCU m7b Disrupted HHHNA_12677_PRKD2|NM_001079880|exon_utr5|-3.91015746034921|1.63667562424729
hsa-miR-4418 cctagagCTGCAGTc CACUGCAG m7b Disrupted HHHNA_12677_PRKD2|NM_001079880|exon_utr5|-3.91015746034921|1.63667562424729
hsa-miR-4660 cctaGAGCTGCAgtc UGCAGCUC m8a Disrupted HHHNA_12677_PRKD2|NM_001079880|exon_utr5|-3.91015746034921|1.63667562424729
hsa-miR-4772-3p cctagaGTTGCAGtc CCUGCAAC m7b Created HHHNA_12677_PRKD2|NM_001079880|exon_utr5|-3.91015746034921|1.63667562424729
hsa-miR-5047 cctagAGCTGCAgtc UUGCAGCU m7b Disrupted HHHNA_12677_PRKD2|NM_001079880|exon_utr5|-3.91015746034921|1.63667562424729
hsa-miR-509-3-5p cctagagCTGCAGTc UACUGCAG m7b Disrupted HHHNA_12677_PRKD2|NM_001079880|exon_utr5|-3.91015746034921|1.63667562424729
hsa-miR-509-5p cctagagCTGCAGTc UACUGCAG m7b Disrupted HHHNA_12677_PRKD2|NM_001079880|exon_utr5|-3.91015746034921|1.63667562424729
hsa-miR-5684 cCTAGAGTTgcagtc AACUCUAG m8a (m7a->m8a) HHHNA_12677_PRKD2|NM_001079880|exon_utr5|-3.91015746034921|1.63667562424729
hsa-miR-618 ccTAGAGTTgcagtc AAACUCUA m7b (m6b->m7b) HHHNA_12677_PRKD2|NM_001079880|exon_utr5|-3.91015746034921|1.63667562424729
hsa-miR-6502-5p cCTAGAGCTgcagtc AGCUCUAG m8a (m8a->m7a) HHHNA_12677_PRKD2|NM_001079880|exon_utr5|-3.91015746034921|1.63667562424729
hsa-miR-1184 cctagaGCTGCAGtc CCUGCAGC m7b Disrupted HHHSA_12677_PRKD2|NM_001079880|exon_utr5|-3.91015746034921|1.63667562424729
hsa-miR-1301-3p cctagAGCTGCAgtc UUGCAGCU m7b Disrupted HHHSA_12677_PRKD2|NM_001079880|exon_utr5|-3.91015746034921|1.63667562424729
hsa-miR-4418 cctagagCTGCAGTc CACUGCAG m7b Disrupted HHHSA_12677_PRKD2|NM_001079880|exon_utr5|-3.91015746034921|1.63667562424729
hsa-miR-4660 cctaGAGCTGCAgtc UGCAGCUC m8a Disrupted HHHSA_12677_PRKD2|NM_001079880|exon_utr5|-3.91015746034921|1.63667562424729
hsa-miR-4772-3p cctagaGTTGCAGtc CCUGCAAC m7b Created HHHSA_12677_PRKD2|NM_001079880|exon_utr5|-3.91015746034921|1.63667562424729
hsa-miR-5047 cctagAGCTGCAgtc UUGCAGCU m7b Disrupted HHHSA_12677_PRKD2|NM_001079880|exon_utr5|-3.91015746034921|1.63667562424729
hsa-miR-509-3-5p cctagagCTGCAGTc UACUGCAG m7b Disrupted HHHSA_12677_PRKD2|NM_001079880|exon_utr5|-3.91015746034921|1.63667562424729
hsa-miR-509-5p cctagagCTGCAGTc UACUGCAG m7b Disrupted HHHSA_12677_PRKD2|NM_001079880|exon_utr5|-3.91015746034921|1.63667562424729
hsa-miR-5684 cCTAGAGTTgcagtc AACUCUAG m8a (m7a->m8a) HHHSA_12677_PRKD2|NM_001079880|exon_utr5|-3.91015746034921|1.63667562424729
hsa-miR-618 ccTAGAGTTgcagtc AAACUCUA m7b (m6b->m7b) HHHSA_12677_PRKD2|NM_001079880|exon_utr5|-3.91015746034921|1.63667562424729
hsa-miR-6502-5p cCTAGAGCTgcagtc AGCUCUAG m8a (m8a->m7a) HHHSA_12677_PRKD2|NM_001079880|exon_utr5|-3.91015746034921|1.63667562424729

*By default, only target sites identified by TargetScan are displayed. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.

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