SomamiR DB 2.0
Somatic mutations altering microRNA-ceRNA interactions
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PolymiRTS Database
Prediction criteria: TargetScan sites only     All 6mer or longer seed matches
Transcript ID: hsa_circ_0072353
Gene Symbol: PRKAA1
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Somatic mutations that impact miRNA target sites


Mutation Mutation ID Sample Name Cancer Type
chr5:g.40777535G>A COSM2689909 TCGA-FV-A3I0-01 [liver][NS][carcinoma][hepatocellular_carcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-1267 ctcaaTCAACAGaag CCUGUUGA m7b Created HHFKP_113236_uc003jmb.1_41_171
hsa-miR-367-5p ctcaatCAACAGaag ACUGUUGC m6b Created HHFKP_113236_uc003jmb.1_41_171
hsa-miR-4652-3p ctcaatcAACAGAAg GUUCUGUU m7b Created HHFKP_113236_uc003jmb.1_41_171
hsa-miR-4743-3p ctcaatcGACAGAAg UUUCUGUC m7b Disrupted HHFKP_113236_uc003jmb.1_41_171
hsa-miR-6888-3p ctcaatcGACAGAag AUCUGUCU m6b Disrupted HHFKP_113236_uc003jmb.1_41_171
hsa-miR-1267 ctcaaTCAACAGaag CCUGUUGA m7b Created HHFKP_113236_uc003jmb.1_41_171
hsa-miR-367-5p ctcaatCAACAGaag ACUGUUGC m6b Created HHFKP_113236_uc003jmb.1_41_171
hsa-miR-4652-3p ctcaatcAACAGAAg GUUCUGUU m7b Created HHFKP_113236_uc003jmb.1_41_171
hsa-miR-4743-3p ctcaatcGACAGAAg UUUCUGUC m7b Disrupted HHFKP_113236_uc003jmb.1_41_171
hsa-miR-6888-3p ctcaatcGACAGAag AUCUGUCU m6b Disrupted HHFKP_113236_uc003jmb.1_41_171

Mutation Mutation ID Sample Name Cancer Type
chr5:g.40777473C>G COSM1068164 TCGA-EY-A1GS-01 [endometrium][NS][carcinoma][endometrioid_carcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-100-3p cctCAAGCTTttcag CAAGCUUG m7b Disrupted HHFCT_122327_uc003jmb.1_36_28
hsa-miR-570-3p cctcaagGTTTTCag CGAAAACA m6b Created HHFCT_122327_uc003jmb.1_36_28
hsa-miR-100-3p cctCAAGCTTttcag CAAGCUUG m7b Disrupted HHFKP_113235_uc003jmb.1_40_34
hsa-miR-570-3p cctcaagGTTTTCag CGAAAACA m6b Created HHFKP_113235_uc003jmb.1_40_34
hsa-miR-100-3p cctCAAGCTTttcag CAAGCUUG m7b Disrupted HHFCT_122327_uc003jmb.1_36_28
hsa-miR-570-3p cctcaagGTTTTCag CGAAAACA m6b Created HHFCT_122327_uc003jmb.1_36_28
hsa-miR-100-3p cctCAAGCTTttcag CAAGCUUG m7b Disrupted HHFKP_113235_uc003jmb.1_40_34
hsa-miR-570-3p cctcaagGTTTTCag CGAAAACA m6b Created HHFKP_113235_uc003jmb.1_40_34

Mutation Mutation ID Sample Name Cancer Type
chr5:g.40777465G>A COSM1068162 TCGA-B5-A11N-01 [endometrium][NS][carcinoma][endometrioid_carcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-1265 ttttcagACATCCTc CAGGAUGU m7b Created HHFCT_122327_uc003jmb.1_36_28
hsa-miR-654-3p ttttCAGACATcctc UAUGUCUG m7b Created HHFCT_122327_uc003jmb.1_36_28
hsa-miR-1265 ttttcagACATCCTc CAGGAUGU m7b Created HHFKP_113235_uc003jmb.1_40_34
hsa-miR-654-3p ttttCAGACATcctc UAUGUCUG m7b Created HHFKP_113235_uc003jmb.1_40_34
hsa-miR-1265 ttttcagACATCCTc CAGGAUGU m7b Created HHFCT_122327_uc003jmb.1_36_28
hsa-miR-654-3p ttttCAGACATcctc UAUGUCUG m7b Created HHFCT_122327_uc003jmb.1_36_28
hsa-miR-1265 ttttcagACATCCTc CAGGAUGU m7b Created HHFKP_113235_uc003jmb.1_40_34
hsa-miR-654-3p ttttCAGACATcctc UAUGUCUG m7b Created HHFKP_113235_uc003jmb.1_40_34

*By default, only target sites identified by TargetScan are displayed. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.

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