SomamiR DB 2.0
Somatic mutations altering microRNA-ceRNA interactions
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PolymiRTS Database
Prediction criteria: TargetScan sites only     All 6mer or longer seed matches
Transcript ID: NM_001206559
Gene Symbol: POLR1D
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Somatic mutations that impact miRNA target sites


Mutation Mutation ID Sample Name Cancer Type
chr13:g.27665756CATA>C COSM1477173 TCGA-C8-A27B-01 [breast][NS][carcinoma][NS]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-4712-3p gccCTCTCATaaagagca AAUGAGAG m7b Disrupted HHFCT_42053_cluster-5896_10_21
hsa-miR-526b-5p gccctCTCAAGAGca CUCUUGAG m8a Created HHFCT_42053_cluster-5896_10_21
Mutation Mutation ID Sample Name Cancer Type
chr13:g.27665741A>C COSM1477172 TCGA-C8-A27B-01 [breast][NS][carcinoma][NS]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
No TargetScan sites are altered. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.


Mutation Mutation ID Sample Name Cancer Type
chr13:g.27665723C>G COSM326211 585208 [lung][NS][carcinoma][small_cell_carcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-520d-5p aagaTTTGTAattaa CUACAAAG m6b Created HHKTA_52568_NM_152705|231|270|1.29803823155271|0.943256795136659
hsa-miR-524-5p aagaTTTGTAattaa CUACAAAG m6b Created HHKTA_52568_NM_152705|231|270|1.29803823155271|0.943256795136659
hsa-miR-5680 aagATTTCTaattaa GAGAAAUG m6b Disrupted HHKTA_52568_NM_152705|231|270|1.29803823155271|0.943256795136659
hsa-miR-4762-5p aAGATTTGtaattaa CCAAAUCU m7b Created HPCB1_11119_G13856.1_28239866
hsa-miR-520d-5p aagaTTTGTAattaa CUACAAAG m6b Created HPCB1_11119_G13856.1_28239866
hsa-miR-524-5p aagaTTTGTAattaa CUACAAAG m6b Created HPCB1_11119_G13856.1_28239866
hsa-miR-5680 aagATTTCTaattaa GAGAAAUG m6b Disrupted HPCB1_11119_G13856.1_28239866
hsa-miR-4762-5p aAGATTTGtaattaa CCAAAUCU m7b Created HPCB3_6182_G8386.1_28239866
hsa-miR-520d-5p aagaTTTGTAattaa CUACAAAG m6b Created HPCB3_6182_G8386.1_28239866
hsa-miR-524-5p aagaTTTGTAattaa CUACAAAG m6b Created HPCB3_6182_G8386.1_28239866
hsa-miR-5680 aagATTTCTaattaa GAGAAAUG m6b Disrupted HPCB3_6182_G8386.1_28239866
hsa-miR-4762-5p aAGATTTGtaattaa CCAAAUCU m7b Created HPRO6_22222_G25912.1_28239883
hsa-miR-520d-5p aagaTTTGTAattaa CUACAAAG m6b Created HPRO6_22222_G25912.1_28239883
hsa-miR-524-5p aagaTTTGTAattaa CUACAAAG m6b Created HPRO6_22222_G25912.1_28239883
hsa-miR-5680 aagATTTCTaattaa GAGAAAUG m6b Disrupted HPRO6_22222_G25912.1_28239883
hsa-miR-4762-5p aAGATTTGtaattaa CCAAAUCU m7b Created HPSD1_2671_G3442.1_28239882
hsa-miR-520d-5p aagaTTTGTAattaa CUACAAAG m6b Created HPSD1_2671_G3442.1_28239882
hsa-miR-524-5p aagaTTTGTAattaa CUACAAAG m6b Created HPSD1_2671_G3442.1_28239882
hsa-miR-5680 aagATTTCTaattaa GAGAAAUG m6b Disrupted HPSD1_2671_G3442.1_28239882
hsa-miR-4762-5p aAGATTTGtaattaa CCAAAUCU m7b Created HPSLC_5257_G6239.1_28239863
hsa-miR-520d-5p aagaTTTGTAattaa CUACAAAG m6b Created HPSLC_5257_G6239.1_28239863
hsa-miR-524-5p aagaTTTGTAattaa CUACAAAG m6b Created HPSLC_5257_G6239.1_28239863
hsa-miR-5680 aagATTTCTaattaa GAGAAAUG m6b Disrupted HPSLC_5257_G6239.1_28239863

Mutation Mutation ID Sample Name Cancer Type
chr13:g.27665719AT>A COSM1168779 8031704 [pancreas][NS][carcinoma][NS]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-5680 ataaaagATTTCTaat GAGAAAUG m6b Disrupted HHKTA_52568_NM_152705|231|270|1.29803823155271|0.943256795136659
hsa-miR-5680 ataaaagATTTCTaat GAGAAAUG m6b Disrupted HPCB1_11119_G13856.1_28239866
hsa-miR-5680 ataaaagATTTCTaat GAGAAAUG m6b Disrupted HPCB3_6182_G8386.1_28239866
hsa-miR-5680 ataaaagATTTCTaat GAGAAAUG m6b Disrupted HPSLC_5257_G6239.1_28239863

Mutation Mutation ID Sample Name Cancer Type
chr13:g.27665696C>T COSM946448 TCGA-D1-A103-01 [endometrium][NS][carcinoma][endometrioid_carcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-1197 gaaGTGTCCTcttgc UAGGACAC m7b Disrupted HHKTA_52568_NM_152705|231|270|1.29803823155271|0.943256795136659
hsa-miR-3925-5p gaagtGTTCTCTTgc AAGAGAAC m8a Created HHKTA_52568_NM_152705|231|270|1.29803823155271|0.943256795136659
hsa-miR-5004-5p gaagTGTCCTCttgc UGAGGACA m7b Disrupted HHKTA_52568_NM_152705|231|270|1.29803823155271|0.943256795136659

*By default, only target sites identified by TargetScan are displayed. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.

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