SomamiR DB 2.0
Somatic mutations altering microRNA-ceRNA interactions
  Home Search Help Download  

PolymiRTS Database
Prediction criteria: TargetScan sites only     All 6mer or longer seed matches
Transcript ID: hsa_circ_0055472
Gene Symbol: POLR1A
Browse Associations
Browse Pathways

Somatic mutations that impact miRNA target sites


Mutation Mutation ID Sample Name Cancer Type
chr2:g.86098685T>C COSM4619798 C80 [large_intestine][colon][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-4266 tcaCCTCCTActctg CUAGGAGG m7b Created HPRO6_46459_G55030.1_86325797
hsa-miR-4695-5p tcaCCTCCTactctg CAGGAGGC m6b Created HPRO6_46459_G55030.1_86325797
hsa-miR-6851-5p tCACCTCCTactctg AGGAGGUG m8a (m7a->m8a) HPRO6_46459_G55030.1_86325797

Mutation Mutation ID Sample Name Cancer Type
chr2:g.86098675A>C COSM3682714 SNUH_G15_S1 [haematopoietic_and_lymphoid_tissue][NS][haematopoietic_neoplasm][acute_myeloid_leukaemia]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-1207-3p ctctgCCAGCTGAgg UCAGCUGG m8a Disrupted HHFKP_76822_cluster-13756_15_9
hsa-miR-6787-3p ctctgccAGCTGAGg UCUCAGCU m7b Disrupted HHFKP_76822_cluster-13756_15_9
hsa-miR-6868-5p ctCTGCCAGctgagg ACUGGCAG m7b (m7b->m6b) HHFKP_76822_cluster-13756_15_9
hsa-miR-7112-5p ctCTGCCCGctgagg ACGGGCAG m7b (m6b->m7b) HHFKP_76822_cluster-13756_15_9
hsa-miR-1207-3p ctctgCCAGCTGAgg UCAGCUGG m8a Disrupted HPRO6_46459_G55030.1_86325797
hsa-miR-6787-3p ctctgccAGCTGAGg UCUCAGCU m7b Disrupted HPRO6_46459_G55030.1_86325797
hsa-miR-6868-5p ctCTGCCAGctgagg ACUGGCAG m7b (m7b->m6b) HPRO6_46459_G55030.1_86325797
hsa-miR-7112-5p ctCTGCCCGctgagg ACGGGCAG m7b (m6b->m7b) HPRO6_46459_G55030.1_86325797

Mutation Mutation ID Sample Name Cancer Type
chr2:g.86088618G>A COSM4133965 PTC-7C [thyroid][NS][other][neoplasm]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-4261 ctatcacGTTTCCag AGGAAACA m6b Disrupted HHFCT_82692_cluster-13756_22_16
hsa-miR-5093 ctatcaCATTTCCag AGGAAAUG m7b Created HHFCT_82692_cluster-13756_22_16
hsa-miR-8066 ctaTCACATTtccag CAAUGUGA m7b Created HHFCT_82692_cluster-13756_22_16

Mutation Mutation ID Sample Name Cancer Type
chr2:g.86088616T>C COSM1023432 TCGA-AP-A056-01 [endometrium][NS][carcinoma][endometrioid_carcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-139-3p atcaCGTCTCCAgcc UGGAGACG m8a Created HHFCT_82692_cluster-13756_22_16
hsa-miR-3135b atcacgtCTCCAGCc GGCUGGAG m7b Created HHFCT_82692_cluster-13756_22_16
hsa-miR-4261 atcacGTTTCCagcc AGGAAACA m6b Disrupted HHFCT_82692_cluster-13756_22_16
hsa-miR-6863 atCACGTCTccagcc UAGACGUG m7b (m6b->m7b) HHFCT_82692_cluster-13756_22_16
hsa-miR-875-3p atcacgTTTCCAGcc CCUGGAAA m7b Disrupted HHFCT_82692_cluster-13756_22_16

Mutation Mutation ID Sample Name Cancer Type
chr2:g.86088577C>T COSM4769686 XHDG38 [biliary_tract][gallbladder][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-24-3p aaggactCTGAGCCc UGGCUCAG m7b Disrupted HHFCT_82692_cluster-13756_22_16
hsa-miR-3973 aaggACTTTGagccc ACAAAGUA m6b Created HHFCT_82692_cluster-13756_22_16
hsa-miR-520g-3p aaggACTTTGagccc ACAAAGUG m6b Created HHFCT_82692_cluster-13756_22_16
hsa-miR-520h aaggACTTTGagccc ACAAAGUG m6b Created HHFCT_82692_cluster-13756_22_16
hsa-miR-6507-3p aaGGACTTTGagccc CAAAGUCC m8a Created HHFCT_82692_cluster-13756_22_16
hsa-miR-759 aaggACTCTGagccc GCAGAGUG m6b Disrupted HHFCT_82692_cluster-13756_22_16

*By default, only target sites identified by TargetScan are displayed. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.

Genome Browser