SomamiR DB 2.0
Somatic mutations altering microRNA-ceRNA interactions
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PolymiRTS Database
Prediction criteria: TargetScan sites only     All 6mer or longer seed matches
Transcript ID: hsa_circ_0055458
Gene Symbol: POLR1A
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Browse Pathways

Somatic mutations that impact miRNA target sites


Mutation Mutation ID Sample Name Cancer Type
chr2:g.86042009G>A COSM163619 PD4197a [NS][NS][NS][NS]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-1265 gtctggCATCCTGac CAGGAUGU m7a Created HHRBL_8333_BCBL1-2of3-SCL_4855
hsa-miR-4436a gtctggcGTCCTGac GCAGGACA m6b Disrupted HHRBL_8333_BCBL1-2of3-SCL_4855

Mutation Mutation ID Sample Name Cancer Type
chr2:g.86040538G>C COSM723004 TCGA-34-2600-01 [lung][NS][carcinoma][squamous_cell_carcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-1207-3p tgCAGCTGAagtggc UCAGCUGG m7a (m7a->m6a) HHFKP_76812_cluster-13756_5_8
hsa-miR-3160-3p tgCAGCTCaagtggc AGAGCUGA m6b Created HHFKP_76812_cluster-13756_5_8
hsa-miR-4487 tgCAGCTCaagtggc AGAGCUGG m6b Created HHFKP_76812_cluster-13756_5_8
hsa-miR-558 tGCAGCTCAagtggc UGAGCUGC m8a (m7a->m8a) HHFKP_76812_cluster-13756_5_8

Mutation Mutation ID Sample Name Cancer Type
chr2:g.86040538G>A COSM4838304 TCGA-EK-A2PL-01 [cervix][NS][carcinoma][squamous_cell_carcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-1207-3p tgCAGCTGAagtggc UCAGCUGG m7a (m7a->m6a) HHFKP_76812_cluster-13756_5_8

Mutation Mutation ID Sample Name Cancer Type
chr2:g.86039660G>A COSN1243752 BN02T [liver][NS][carcinoma][NS]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-3183 cctccAGAGAGGaaa GCCUCUCU m7b Created HHFCT_82680_cluster-13756_9_8
hsa-miR-3191-5p cctCCAGAGAGgaaa CUCUCUGG m8a Created HHFCT_82680_cluster-13756_9_8
hsa-miR-326 cctCCAGAGaggaaa CCUCUGGG m6b Created HHFCT_82680_cluster-13756_9_8
hsa-miR-4254 cCTCCAGGgaggaaa GCCUGGAG m7b Disrupted HHFCT_82680_cluster-13756_9_8
hsa-miR-4292 cctCCAGGGaggaaa CCCCUGGG m6b Disrupted HHFCT_82680_cluster-13756_9_8
hsa-miR-4308 ccTCCAGGGAggaaa UCCCUGGA m8a Disrupted HHFCT_82680_cluster-13756_9_8
hsa-miR-4691-5p cctccagGGAGGAaa GUCCUCCA m6b Disrupted HHFCT_82680_cluster-13756_9_8
hsa-miR-4723-3p cctccAGAGAGGaaa CCCUCUCU m7b Created HHFCT_82680_cluster-13756_9_8
hsa-miR-516b-5p cCTCCAGAgaggaaa AUCUGGAG m7b Created HHFCT_82680_cluster-13756_9_8
hsa-miR-518c-5p ccTCCAGAGAggaaa UCUCUGGA m8a Created HHFCT_82680_cluster-13756_9_8
hsa-miR-6749-3p cctccaGGGAGGAaa CUCCUCCC m7b Disrupted HHFCT_82680_cluster-13756_9_8
hsa-miR-6769b-3p cctccAGAGAGGaaa CCCUCUCU m7b Created HHFCT_82680_cluster-13756_9_8
hsa-miR-6780a-3p cctccagAGAGGAaa CUCCUCUG m6b Created HHFCT_82680_cluster-13756_9_8
hsa-miR-6791-5p cctCCAGGGaggaaa CCCCUGGG m6b Disrupted HHFCT_82680_cluster-13756_9_8
hsa-miR-6792-3p cctccagGGAGGAaa CUCCUCCA m6b Disrupted HHFCT_82680_cluster-13756_9_8
hsa-miR-6817-3p cctcCAGAGAGgaaa UCUCUCUG m7b Created HHFCT_82680_cluster-13756_9_8
hsa-miR-6881-3p cctccagAGAGGAaa AUCCUCUU m6b Created HHFCT_82680_cluster-13756_9_8
hsa-miR-7111-3p cctccaGAGAGGAaa AUCCUCUC m7b Created HHFCT_82680_cluster-13756_9_8
hsa-miR-7113-3p cctcCAGGGAGGaaa CCUCCCUG m8a Disrupted HHFCT_82680_cluster-13756_9_8
hsa-miR-3183 cctccAGAGAGGaaa GCCUCUCU m7b Created HHFCT_82680_cluster-13756_9_8
hsa-miR-3191-5p cctCCAGAGAGgaaa CUCUCUGG m8a Created HHFCT_82680_cluster-13756_9_8
hsa-miR-326 cctCCAGAGaggaaa CCUCUGGG m6b Created HHFCT_82680_cluster-13756_9_8
hsa-miR-4254 cCTCCAGGgaggaaa GCCUGGAG m7b Disrupted HHFCT_82680_cluster-13756_9_8
hsa-miR-4292 cctCCAGGGaggaaa CCCCUGGG m6b Disrupted HHFCT_82680_cluster-13756_9_8
hsa-miR-4308 ccTCCAGGGAggaaa UCCCUGGA m8a Disrupted HHFCT_82680_cluster-13756_9_8
hsa-miR-4691-5p cctccagGGAGGAaa GUCCUCCA m6b Disrupted HHFCT_82680_cluster-13756_9_8
hsa-miR-4723-3p cctccAGAGAGGaaa CCCUCUCU m7b Created HHFCT_82680_cluster-13756_9_8
hsa-miR-516b-5p cCTCCAGAgaggaaa AUCUGGAG m7b Created HHFCT_82680_cluster-13756_9_8
hsa-miR-518c-5p ccTCCAGAGAggaaa UCUCUGGA m8a Created HHFCT_82680_cluster-13756_9_8
hsa-miR-6749-3p cctccaGGGAGGAaa CUCCUCCC m7b Disrupted HHFCT_82680_cluster-13756_9_8
hsa-miR-6769b-3p cctccAGAGAGGaaa CCCUCUCU m7b Created HHFCT_82680_cluster-13756_9_8
hsa-miR-6780a-3p cctccagAGAGGAaa CUCCUCUG m6b Created HHFCT_82680_cluster-13756_9_8
hsa-miR-6791-5p cctCCAGGGaggaaa CCCCUGGG m6b Disrupted HHFCT_82680_cluster-13756_9_8
hsa-miR-6792-3p cctccagGGAGGAaa CUCCUCCA m6b Disrupted HHFCT_82680_cluster-13756_9_8
hsa-miR-6817-3p cctcCAGAGAGgaaa UCUCUCUG m7b Created HHFCT_82680_cluster-13756_9_8
hsa-miR-6881-3p cctccagAGAGGAaa AUCCUCUU m6b Created HHFCT_82680_cluster-13756_9_8
hsa-miR-7111-3p cctccaGAGAGGAaa AUCCUCUC m7b Created HHFCT_82680_cluster-13756_9_8
hsa-miR-7113-3p cctcCAGGGAGGaaa CCUCCCUG m8a Disrupted HHFCT_82680_cluster-13756_9_8

Mutation Mutation ID Sample Name Cancer Type
chr2:g.86039435C>T COSM4096080 TCGA-CG-4442-01 [stomach][NS][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-1271-5p tggccaGTGCCAAca CUUGGCAC m7b Created HHFKP_76811_cluster-13756_4_77
hsa-miR-96-5p tggccaGTGCCAAca UUUGGCAC m7b Created HHFKP_76811_cluster-13756_4_77

Mutation Mutation ID Sample Name Cancer Type
chr2:g.86039417C>G COSM576347 TCGA-05-4396-01 [lung][NS][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-136-3p agacacCGATGATGa CAUCAUCG m8a Created HHFKP_76811_cluster-13756_4_77
hsa-miR-2681-3p agacacCCATGATga UAUCAUGG m7b Disrupted HHFKP_76811_cluster-13756_4_77
hsa-miR-4455 agACACCCatgatga AGGGUGUG m6b Disrupted HHFKP_76811_cluster-13756_4_77
hsa-miR-609 agACACCCatgatga AGGGUGUU m6b Disrupted HHFKP_76811_cluster-13756_4_77

Mutation Mutation ID Sample Name Cancer Type
chr2:g.86039408C>T COSM1409810 TCGA-AA-3713-01 [large_intestine][colon][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-574-3p tgaTGAGCGTGcccg CACGCUCA m8a Disrupted HHFKP_76811_cluster-13756_4_77
hsa-miR-8064 tgatgAGTGTGCccg AGCACACU m7b Created HHFKP_76811_cluster-13756_4_77

Mutation Mutation ID Sample Name Cancer Type
chr2:g.86039407G>T COSM4716499 T670 [large_intestine][colon][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-574-3p gaTGAGCGTGcccgt CACGCUCA m8a Disrupted HHFKP_76811_cluster-13756_4_77

Mutation Mutation ID Sample Name Cancer Type
chr2:g.86038791T>C COSM2822838 SW48 [large_intestine][NS][other][neoplasm]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-133a-5p ccaggtgTACCAGCt AGCUGGUA m7b Disrupted HHFCT_82679_cluster-13756_8_8
hsa-miR-138-5p ccaggtgCACCAGCt AGCUGGUG m7b Created HHFCT_82679_cluster-13756_8_8
hsa-miR-150-3p ccaggTGTACCAGct CUGGUACA m8a Disrupted HHFCT_82679_cluster-13756_8_8
hsa-miR-500a-3p ccAGGTGCAccagct AUGCACCU m7b (m6b->m7b) HHFCT_82679_cluster-13756_8_8
hsa-miR-548q ccaggtGCACCAGCt GCUGGUGC m8a Created HHFCT_82679_cluster-13756_8_8
hsa-miR-6804-3p cCAGGTGCaccagct CGCACCUG m7b Created HHFCT_82679_cluster-13756_8_8

*By default, only target sites identified by TargetScan are displayed. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.

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