SomamiR DB 2.0
Somatic mutations altering microRNA-ceRNA interactions
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PolymiRTS Database
Prediction criteria: TargetScan sites only     All 6mer or longer seed matches
Transcript ID: hsa_circ_0055453
Gene Symbol: POLR1A
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Somatic mutations that impact miRNA target sites


Mutation Mutation ID Sample Name Cancer Type
chr2:g.86028641C>T COSM576350 TCGA-38-4629-01 [lung][NS][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-3177-3p gagGCCGTGCtgcgg UGCACGGC m7b Created HHKTA_23051_NM_015425|5225|5264|3.20182763783002|0.470684999107261
hsa-miR-4479 gagGCCGCGCtgcgg CGCGCGGC m7b Disrupted HHKTA_23051_NM_015425|5225|5264|3.20182763783002|0.470684999107261

Mutation Mutation ID Sample Name Cancer Type
chr2:g.86028636C>T COSM4096077 TCGA-HU-A4GU-01 [stomach][NS][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-500b-3p cgcgctgTGGGTGat GCACCCAG m6b Created HHKTA_23051_NM_015425|5225|5264|3.20182763783002|0.470684999107261

Mutation Mutation ID Sample Name Cancer Type
chr2:g.86027985C>A COSM4164600 C0016T [kidney][NS][other][neoplasm]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-30a-5p gTGTTTACAagccac UGUAAACA m8a (m8a->m7a) HHFCT_82674_cluster-13756_3_12
hsa-miR-30b-5p gTGTTTACAagccac UGUAAACA m8a (m8a->m7a) HHFCT_82674_cluster-13756_3_12
hsa-miR-30c-5p gTGTTTACAagccac UGUAAACA m8a (m8a->m7a) HHFCT_82674_cluster-13756_3_12
hsa-miR-30d-5p gTGTTTACAagccac UGUAAACA m8a (m8a->m7a) HHFCT_82674_cluster-13756_3_12
hsa-miR-30e-5p gTGTTTACAagccac UGUAAACA m8a (m8a->m7a) HHFCT_82674_cluster-13756_3_12
hsa-miR-3119 gtgtttAAAAGCCAc UGGCUUUU m8a Created HHFCT_82674_cluster-13756_3_12
hsa-miR-30a-5p gTGTTTACAagccac UGUAAACA m8a (m8a->m7a) HPCB1_23287_G29453.1_86255094
hsa-miR-30b-5p gTGTTTACAagccac UGUAAACA m8a (m8a->m7a) HPCB1_23287_G29453.1_86255094
hsa-miR-30c-5p gTGTTTACAagccac UGUAAACA m8a (m8a->m7a) HPCB1_23287_G29453.1_86255094
hsa-miR-30d-5p gTGTTTACAagccac UGUAAACA m8a (m8a->m7a) HPCB1_23287_G29453.1_86255094
hsa-miR-30e-5p gTGTTTACAagccac UGUAAACA m8a (m8a->m7a) HPCB1_23287_G29453.1_86255094
hsa-miR-3119 gtgtttAAAAGCCAc UGGCUUUU m8a Created HPCB1_23287_G29453.1_86255094

Mutation Mutation ID Sample Name Cancer Type
chr2:g.86027952C>T COSM118922 TCGA-59-2350-01 [ovary][NS][carcinoma][serous_carcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-6077 ggtcaaaCTCTTCCc GGGAAGAG m7b Disrupted HHFCT_82674_cluster-13756_3_12

Mutation Mutation ID Sample Name Cancer Type
chr2:g.86027946C>T COSM3583790 TCGA-D3-A2J8-06 [skin][NS][malignant_melanoma][NS]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-1253 acTCTTCTCcgctac AGAGAAGA m7b (m6b->m7b) HHFCT_82674_cluster-13756_3_12
hsa-miR-4271 actCTTCCCCgctac GGGGGAAG m7b Disrupted HHFCT_82674_cluster-13756_3_12
hsa-miR-4434 actCTTCTCCgctac AGGAGAAG m7b Created HHFCT_82674_cluster-13756_3_12
hsa-miR-4516 actCTTCTCCgctac GGGAGAAG m7b Created HHFCT_82674_cluster-13756_3_12
hsa-miR-4706 actctTCCCCGCTac AGCGGGGA m8a Disrupted HHFCT_82674_cluster-13756_3_12
hsa-miR-4725-3p actCTTCCCCgctac UGGGGAAG m7b Disrupted HHFCT_82674_cluster-13756_3_12
hsa-miR-4749-5p actctTCCCCGCtac UGCGGGGA m7b Disrupted HHFCT_82674_cluster-13756_3_12
hsa-miR-4781-5p actcttCCCCGCTAc UAGCGGGG m8a Disrupted HHFCT_82674_cluster-13756_3_12
hsa-miR-5197-3p aCTCTTCTccgctac AAGAAGAG m7b Created HHFCT_82674_cluster-13756_3_12
hsa-miR-5703 actCTTCTCCgctac AGGAGAAG m7b Created HHFCT_82674_cluster-13756_3_12
hsa-miR-6077 aCTCTTCCCcgctac GGGAAGAG m8a (m8a->m7a) HHFCT_82674_cluster-13756_3_12
hsa-miR-6780b-5p actCTTCCCCgctac UGGGGAAG m7b Disrupted HHFCT_82674_cluster-13756_3_12
hsa-miR-7846-3p actcttCTCCGCTac CAGCGGAG m7b Created HHFCT_82674_cluster-13756_3_12

*By default, only target sites identified by TargetScan are displayed. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.

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