SomamiR DB 2.0
Somatic mutations altering microRNA-ceRNA interactions
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PolymiRTS Database
Prediction criteria: TargetScan sites only     All 6mer or longer seed matches
Transcript ID: hsa_circ_0002472
Gene Symbol: PLXNA2
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Somatic mutations that impact miRNA target sites


Mutation Mutation ID Sample Name Cancer Type
chr1:g.208217490C>T COSM3864353 TCGA-FW-A3R5-06 [skin][NS][malignant_melanoma][NS]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-3185 ggatgaCTTCTTCat AGAAGAAG m7b Created HHFCT_6635_cluster-2151_9_8
hsa-miR-4709-3p ggatgacCTCTTCAt UUGAAGAG m7b Disrupted HHFCT_6635_cluster-2151_9_8

Mutation Mutation ID Sample Name Cancer Type
chr1:g.208217475G>C COSM4994250 SJBALL247_D [haematopoietic_and_lymphoid_tissue][NS][lymphoid_neoplasm][acute_lymphoblastic_B_cell_leukaemia]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-3130-3p cctGGTGCAGCcatc GCUGCACC m8a Created HHFCT_6635_cluster-2151_9_8
hsa-miR-4733-3p CCTGGTGGagccatc CCACCAGG m8a Disrupted HHFCT_6635_cluster-2151_9_8
hsa-miR-604 cctggtGCAGCCatc AGGCUGCG m6b Created HHFCT_6635_cluster-2151_9_8
hsa-miR-647 cctggtGCAGCCAtc GUGGCUGC m7b Created HHFCT_6635_cluster-2151_9_8
hsa-miR-889-5p cctggtgCAGCCATc AAUGGCUG m7b Created HHFCT_6635_cluster-2151_9_8

Mutation Mutation ID Sample Name Cancer Type
chr1:g.208217475G>A COSM1127156 TCGA-EJ-5495-01 [prostate][NS][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-135a-5p cctggtgAAGCCATc UAUGGCUU m7b Created HHFCT_6635_cluster-2151_9_8
hsa-miR-135b-5p cctggtgAAGCCATc UAUGGCUU m7b Created HHFCT_6635_cluster-2151_9_8
hsa-miR-412-3p cctGGTGAAGccatc ACUUCACC m7b Created HHFCT_6635_cluster-2151_9_8
hsa-miR-4733-3p CCTGGTGGagccatc CCACCAGG m8a Disrupted HHFCT_6635_cluster-2151_9_8
hsa-miR-6754-3p cctGGTGAAGccatc UCUUCACC m7b Created HHFCT_6635_cluster-2151_9_8

Mutation Mutation ID Sample Name Cancer Type
chr1:g.208216928GGA>AAA COSM4519133 CSCC-10-T [skin][head_neck][carcinoma][squamous_cell_carcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-221-5p ccaGCCAGGacgatgta ACCUGGCA m6b Disrupted HHFKP_6380_cluster-2151_9_70
hsa-miR-3064-5p cCAGCCAGgacgatgta UCUGGCUG m7b Disrupted HHFKP_6380_cluster-2151_9_70
hsa-miR-6504-5p cCAGCCAGgacgatgta UCUGGCUG m7b Disrupted HHFKP_6380_cluster-2151_9_70
hsa-miR-6842-3p CCAGCCAAaacgatgta UUGGCUGG m8a Created HHFKP_6380_cluster-2151_9_70
hsa-miR-8073 ccaGCCAGGacgatgta ACCUGGCA m6b Disrupted HHFKP_6380_cluster-2151_9_70

Mutation Mutation ID Sample Name Cancer Type
chr1:g.208216881C>A COSM163572 PD4200a [NS][NS][NS][NS]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-1293 gtatcACCACCCgcc UGGGUGGU m7b Disrupted HHFCT_6634_cluster-2151_8_8
hsa-miR-3656 gtatcacCACCCGCc GGCGGGUG m7b Disrupted HHFCT_6634_cluster-2151_8_8
hsa-miR-3689a-5p gTATCACAacccgcc UGUGAUAU m7a Created HHFCT_6634_cluster-2151_8_8
hsa-miR-3689b-5p gTATCACAacccgcc UGUGAUAU m7a Created HHFCT_6634_cluster-2151_8_8
hsa-miR-3689e gTATCACAacccgcc UGUGAUAU m7a Created HHFCT_6634_cluster-2151_8_8
hsa-miR-3689f gTATCACAacccgcc UGUGAUAU m7a Created HHFCT_6634_cluster-2151_8_8
hsa-miR-4483 gtatcACCACCCgcc GGGGUGGU m7b Disrupted HHFCT_6634_cluster-2151_8_8
hsa-miR-8070 gtATCACAacccgcc AUGUGAUU m6b Created HHFCT_6634_cluster-2151_8_8

Mutation Mutation ID Sample Name Cancer Type
chr1:g.208216877C>T COSM1582887 56506 [meninges][NS][meningioma][secretory]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-1293 cACCACCCgcccgat UGGGUGGU m7b Disrupted HHFCT_6634_cluster-2151_8_8
hsa-miR-3656 cacCACCCGCCcgat GGCGGGUG m8a Disrupted HHFCT_6634_cluster-2151_8_8
hsa-miR-3665 cacCACCTGCccgat AGCAGGUG m7b Created HHFCT_6634_cluster-2151_8_8
hsa-miR-4483 cACCACCCgcccgat GGGGUGGU m7b Disrupted HHFCT_6634_cluster-2151_8_8
hsa-miR-4736 caccACCTGCCcgat AGGCAGGU m7b Created HHFCT_6634_cluster-2151_8_8
hsa-miR-4750-5p caccaccCGCCCGAt CUCGGGCG m7b Disrupted HHFCT_6634_cluster-2151_8_8
hsa-miR-6721-5p caccaCCTGCCCgat UGGGCAGG m7b Created HHFCT_6634_cluster-2151_8_8
hsa-miR-7112-5p caccacCTGCCCGat ACGGGCAG m7b Created HHFCT_6634_cluster-2151_8_8

*By default, only target sites identified by TargetScan are displayed. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.

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