SomamiR DB 2.0
Somatic mutations altering microRNA-ceRNA interactions
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PolymiRTS Database

Prediction criteria: TargetScan sites only     All 6mer or longer seed matches

Transcript ID: hsa_circ_0072557
Gene Symbol: PLK2
Browse Associations

Somatic mutations that impact miRNA target sites



Mutation Mutation ID Sample Name Cancer Type
chr5:g.58457322T>C COSM3761267 TCGA-AM-5821-01 [large_intestine][colon][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-6804-3p aaacttaCAGGTGCa CGCACCUG m7b Created HHFKP_113552_uc003jrn.1_12_309

Mutation Mutation ID Sample Name Cancer Type
chr5:g.58457301G>A COSM4934747 TCGA-DD-A3A0-01 [liver][NS][carcinoma][hepatocellular_carcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-1915-5p aaGCAAGGTatacaa ACCUUGCC m7a (m7a->m6a) HHFKP_113552_uc003jrn.1_12_309
hsa-miR-3144-3p aagcaAGGTATAcaa AUAUACCU m7b Disrupted HHFKP_113552_uc003jrn.1_12_309
hsa-miR-3200-3p aaGCAAGGTatacaa CACCUUGC m7b (m7b->m6b) HHFKP_113552_uc003jrn.1_12_309
hsa-miR-6813-3p aagCAAGGTatacaa AACCUUGG m6b Disrupted HHFKP_113552_uc003jrn.1_12_309
hsa-miR-6841-3p aaGCAAGGTatacaa ACCUUGCA m7a (m7a->m6a) HHFKP_113552_uc003jrn.1_12_309

Mutation Mutation ID Sample Name Cancer Type
chr5:g.58457297A>G COSM1221209 587376 [large_intestine][colon][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-568 aaggTATACAatgcc AUGUAUAA m6b Disrupted HHFKP_113552_uc003jrn.1_12_309
hsa-miR-5689 aagGTATGCaatgcc AGCAUACA m6b Created HHFKP_113552_uc003jrn.1_12_309
hsa-miR-3144-3p aAGGTATAcaatgcc AUAUACCU m7b Disrupted HHFKP_113552_uc003jrn.1_12_309

Mutation Mutation ID Sample Name Cancer Type
chr5:g.58457224G>A COSM246669 PR-00-1165 [prostate][NS][carcinoma][NS]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-5187-5p gaggaTCATCCCAgt UGGGAUGA m8a Created HHFCT_122673_uc003jrn.1_12_60
hsa-miR-619-5p gaggatcATCCCAGt GCUGGGAU m7b Created HHFCT_122673_uc003jrn.1_12_60
hsa-miR-6506-5p gaggatcATCCCAGt ACUGGGAU m7b Created HHFCT_122673_uc003jrn.1_12_60
hsa-miR-6728-5p gaggatCATCCCAgt UUGGGAUG m7b Created HHFCT_122673_uc003jrn.1_12_60
hsa-miR-92b-5p gaggatCGTCCCagt AGGGACGG m6b Disrupted HHFCT_122673_uc003jrn.1_12_60

*By default, only target sites identified by TargetScan are displayed. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.

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