SomamiR DB 2.0
Somatic mutations altering microRNA-ceRNA interactions
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PolymiRTS Database

Prediction criteria: TargetScan sites only     All 6mer or longer seed matches

Transcript ID: NM_080476
Gene Symbol: PIGU
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Somatic mutations that impact miRNA target sites



Mutation Mutation ID Sample Name Cancer Type
chr20:g.34677017T>G COSM211595 266395AML [haematopoietic_and_lymphoid_tissue][NS][haematopoietic_neoplasm][NS]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-6849-3p gctccAGGCTGGccg ACCAGCCU m7b Created HHFCT_93834_cluster-14684_14_9
hsa-miR-1254 gcTCCAGGCTggccg AGCCUGGA m8a Created HHFCT_93834_cluster-14684_14_9
hsa-miR-3116 gcTCCAGGCtggccg UGCCUGGA m7b (m6b->m7b) HHFCT_93834_cluster-14684_14_9
hsa-miR-3194-5p gctccaGGCTGGCCg GGCCAGCC m8a Created HHFCT_93834_cluster-14684_14_9
hsa-miR-4254 gCTCCAGGCtggccg GCCUGGAG m8a (m7a->m8a) HHFCT_93834_cluster-14684_14_9
hsa-miR-4463 gctCCAGTCTggccg GAGACUGG m7b Disrupted HHFCT_93834_cluster-14684_14_9
hsa-miR-4494 gctcCAGTCTGGccg CCAGACUG m8a Disrupted HHFCT_93834_cluster-14684_14_9

*By default, only target sites identified by TargetScan are displayed. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.

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