SomamiR DB 2.0
Somatic mutations altering microRNA-ceRNA interactions
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PolymiRTS Database
Prediction criteria: TargetScan sites only     All 6mer or longer seed matches
Transcript ID: hsa_circ_0017472
Gene Symbol: PFKP
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Somatic mutations that impact miRNA target sites


Mutation Mutation ID Sample Name Cancer Type
chr10:g.3067627G>A COSM4794434 CHC892T [liver][NS][carcinoma][hepatocellular_carcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-1233-3p cccaAGGGCTCcttg UGAGCCCU m7b Disrupted HHHNA_2918_PFKP|NM_002627|exon_utr5|-4.47388204998737|-0.628499062234541
hsa-miR-1289 cccaaGGACTCCttg UGGAGUCC m7b Created HHHNA_2918_PFKP|NM_002627|exon_utr5|-4.47388204998737|-0.628499062234541
hsa-miR-129-1-3p cccAAGGGCTccttg AAGCCCUU m7b Disrupted HHHNA_2918_PFKP|NM_002627|exon_utr5|-4.47388204998737|-0.628499062234541
hsa-miR-129-2-3p cccAAGGGCTccttg AAGCCCUU m7b Disrupted HHHNA_2918_PFKP|NM_002627|exon_utr5|-4.47388204998737|-0.628499062234541
hsa-miR-3189-3p CCCAAGGGctccttg CCCUUGGG m8a Disrupted HHHNA_2918_PFKP|NM_002627|exon_utr5|-4.47388204998737|-0.628499062234541
hsa-miR-1233-3p cccaAGGGCTCcttg UGAGCCCU m7b Disrupted HHHSA_2918_PFKP|NM_002627|exon_utr5|-4.47388204998737|-0.628499062234541
hsa-miR-1289 cccaaGGACTCCttg UGGAGUCC m7b Created HHHSA_2918_PFKP|NM_002627|exon_utr5|-4.47388204998737|-0.628499062234541
hsa-miR-129-1-3p cccAAGGGCTccttg AAGCCCUU m7b Disrupted HHHSA_2918_PFKP|NM_002627|exon_utr5|-4.47388204998737|-0.628499062234541
hsa-miR-129-2-3p cccAAGGGCTccttg AAGCCCUU m7b Disrupted HHHSA_2918_PFKP|NM_002627|exon_utr5|-4.47388204998737|-0.628499062234541
hsa-miR-3189-3p CCCAAGGGctccttg CCCUUGGG m8a Disrupted HHHSA_2918_PFKP|NM_002627|exon_utr5|-4.47388204998737|-0.628499062234541
Mutation Mutation ID Sample Name Cancer Type
chr10:g.3067602G>C COSM4629072 Gp5D [large_intestine][NS][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
No TargetScan sites are altered. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.


Mutation Mutation ID Sample Name Cancer Type
chr10:g.3067601C>G COSM4594878 Detroit_562 [upper_aerodigestive_tract][pharynx][carcinoma][squamous_cell_carcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-1281 ccatGGAGGCGgacg UCGCCUCC m7b Created HHHNA_2918_PFKP|NM_002627|exon_utr5|-4.47388204998737|-0.628499062234541
hsa-miR-4485-5p ccatggAGGCGGacg ACCGCCUG m6b Created HHHNA_2918_PFKP|NM_002627|exon_utr5|-4.47388204998737|-0.628499062234541
hsa-miR-1281 ccatGGAGGCGgacg UCGCCUCC m7b Created HHHSA_2918_PFKP|NM_002627|exon_utr5|-4.47388204998737|-0.628499062234541
hsa-miR-4485-5p ccatggAGGCGGacg ACCGCCUG m6b Created HHHSA_2918_PFKP|NM_002627|exon_utr5|-4.47388204998737|-0.628499062234541

*By default, only target sites identified by TargetScan are displayed. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.

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