SomamiR DB 2.0
Somatic mutations altering microRNA-ceRNA interactions
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PolymiRTS Database
Prediction criteria: TargetScan sites only     All 6mer or longer seed matches
Transcript ID: NM_000318
Gene Symbol: PEX2
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Somatic mutations that impact miRNA target sites


Mutation Mutation ID Sample Name Cancer Type
chr8:g.76984118G>A COSM606327 TCGA-55-5899-01 [lung][NS][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-324-5p ccagttGGATGCact CGCAUCCC m6b Disrupted HPKTA_60240_G65147.1_77896348
hsa-miR-4272 ccaGTTGAATGcact CAUUCAAC m8a Created HPKTA_60240_G65147.1_77896348

Mutation Mutation ID Sample Name Cancer Type
chr8:g.76984111T>C COSM4163082 PTC-7C [thyroid][NS][other][neoplasm]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-125a-3p gatgCACCTGaacta ACAGGUGA m6b Created HPKTA_60240_G65147.1_77896348
hsa-miR-3934-5p gatgCACCTGAacta UCAGGUGU m7a Created HPKTA_60240_G65147.1_77896348
hsa-miR-4465 gatgcACTTGAacta CUCAAGUA m6b Disrupted HPKTA_60240_G65147.1_77896348
hsa-miR-5000-5p gatgcacCTGAACTa CAGUUCAG m7b Created HPKTA_60240_G65147.1_77896348
hsa-miR-519a-3p gaTGCACTTgaacta AAAGUGCA m7b (m7b->m6b) HPKTA_60240_G65147.1_77896348
hsa-miR-519b-3p gaTGCACTTgaacta AAAGUGCA m7b (m7b->m6b) HPKTA_60240_G65147.1_77896348
hsa-miR-519c-3p gaTGCACTTgaacta AAAGUGCA m7b (m7b->m6b) HPKTA_60240_G65147.1_77896348
hsa-miR-6513-3p gatgCACTTGAacta UCAAGUGU m7a Disrupted HPKTA_60240_G65147.1_77896348
hsa-miR-764 gatGCACCTGaacta GCAGGUGC m7b Created HPKTA_60240_G65147.1_77896348

Mutation Mutation ID Sample Name Cancer Type
chr8:g.76983637A>G COSM3901676 TCGA-HU-A4H8-01 [stomach][NS][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-1304-5p aaGCCTCAAAacata UUUGAGGC m8a Disrupted HHFKP_139198_cluster-22413_5_44
hsa-miR-19a-5p aagcctCAAAACata AGUUUUGC m6b Disrupted HHFKP_139198_cluster-22413_5_44
hsa-miR-19b-1-5p aagcctCAAAACata AGUUUUGC m6b Disrupted HHFKP_139198_cluster-22413_5_44
hsa-miR-19b-2-5p aagcctCAAAACata AGUUUUGC m6b Disrupted HHFKP_139198_cluster-22413_5_44
hsa-miR-2052 aagccTCAAAACAta UGUUUUGA m8a Disrupted HHFKP_139198_cluster-22413_5_44
hsa-miR-2467-5p aAGCCTCAaaacata UGAGGCUC m7a Disrupted HHFKP_139198_cluster-22413_5_44
hsa-miR-3975 aAGCCTCAaaacata UGAGGCUA m7a Disrupted HHFKP_139198_cluster-22413_5_44
hsa-miR-4307 aagcctcAAAACATa AAUGUUUU m7b Disrupted HHFKP_139198_cluster-22413_5_44
hsa-miR-6765-5p aaGCCTCAaaacata GUGAGGCG m6b Disrupted HHFKP_139198_cluster-22413_5_44
hsa-miR-8055 aagcCTCAAAacata CUUUGAGC m6b Disrupted HHFKP_139198_cluster-22413_5_44

Mutation Mutation ID Sample Name Cancer Type
chr8:g.76983558C>T COSM1101866 TCGA-D1-A168-01 [endometrium][NS][carcinoma][endometrioid_carcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-3925-5p tttTTCTCTTaccac AAGAGAAC m7a Disrupted HPCB1_40218_G51428.1_77895778

Mutation Mutation ID Sample Name Cancer Type
chr8:g.76983546C>T COSM389659 LUAD_E00565 [lung][NS][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-3161 caCTTATCAatgtcc CUGAUAAG m7b (m7b->m6b) HPCB1_40218_G51428.1_77895778
Mutation Mutation ID Sample Name Cancer Type
chr8:g.76983544A>G COSM1187566 LC_S3 [lung][NS][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
No TargetScan sites are altered. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.


Mutation Mutation ID Sample Name Cancer Type
chr8:g.76983032A>G COSN2290367 RK157_C01 [liver][NS][carcinoma][NS]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-3117-5p attttTAGTGTCaag AGACACUA m7b Created HHFKP_139196_cluster-22413_3_119
hsa-miR-4704-5p attttTAGTGTCaag GACACUAG m7a Created HHFKP_139196_cluster-22413_3_119
hsa-miR-489-3p atttttaATGTCAag GUGACAUC m6b Disrupted HHFKP_139196_cluster-22413_3_119
hsa-miR-514a-3p atttttaGTGTCAAg AUUGACAC m7b Created HHFKP_139196_cluster-22413_3_119
hsa-miR-514b-3p atttttaGTGTCAAg AUUGACAC m7b Created HHFKP_139196_cluster-22413_3_119
hsa-miR-3117-5p attttTAGTGTCaag AGACACUA m7b Created HPCB1_40215_G51425.1_77895284
hsa-miR-4704-5p attttTAGTGTCaag GACACUAG m7a Created HPCB1_40215_G51425.1_77895284
hsa-miR-489-3p atttttaATGTCAag GUGACAUC m6b Disrupted HPCB1_40215_G51425.1_77895284
hsa-miR-514a-3p atttttaGTGTCAAg AUUGACAC m7b Created HPCB1_40215_G51425.1_77895284
hsa-miR-514b-3p atttttaGTGTCAAg AUUGACAC m7b Created HPCB1_40215_G51425.1_77895284
hsa-miR-3117-5p attttTAGTGTCaag AGACACUA m7b Created HPCB3_23478_G32208.1_77895284
hsa-miR-4704-5p attttTAGTGTCaag GACACUAG m7a Created HPCB3_23478_G32208.1_77895284
hsa-miR-489-3p atttttaATGTCAag GUGACAUC m6b Disrupted HPCB3_23478_G32208.1_77895284
hsa-miR-514a-3p atttttaGTGTCAAg AUUGACAC m7b Created HPCB3_23478_G32208.1_77895284
hsa-miR-514b-3p atttttaGTGTCAAg AUUGACAC m7b Created HPCB3_23478_G32208.1_77895284
hsa-miR-3117-5p attttTAGTGTCaag AGACACUA m7b Created HPSLB_7329_G8950.1_77895284
hsa-miR-4704-5p attttTAGTGTCaag GACACUAG m7a Created HPSLB_7329_G8950.1_77895284
hsa-miR-489-3p atttttaATGTCAag GUGACAUC m6b Disrupted HPSLB_7329_G8950.1_77895284
hsa-miR-514a-3p atttttaGTGTCAAg AUUGACAC m7b Created HPSLB_7329_G8950.1_77895284
hsa-miR-514b-3p atttttaGTGTCAAg AUUGACAC m7b Created HPSLB_7329_G8950.1_77895284
hsa-miR-3117-5p attttTAGTGTCaag AGACACUA m7b Created HPSLC_19339_G23048.1_77895284
hsa-miR-4704-5p attttTAGTGTCaag GACACUAG m7a Created HPSLC_19339_G23048.1_77895284
hsa-miR-489-3p atttttaATGTCAag GUGACAUC m6b Disrupted HPSLC_19339_G23048.1_77895284
hsa-miR-514a-3p atttttaGTGTCAAg AUUGACAC m7b Created HPSLC_19339_G23048.1_77895284
hsa-miR-514b-3p atttttaGTGTCAAg AUUGACAC m7b Created HPSLC_19339_G23048.1_77895284

Mutation Mutation ID Sample Name Cancer Type
chr8:g.76981498A>T COSN8102028 8033691 [pancreas][NS][carcinoma][NS]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-508-3p taTACAATCgtcttt UGAUUGUA m7b (m6b->m7b) HPSEF_22372_G27091.1_77893740

Mutation Mutation ID Sample Name Cancer Type
chr8:g.76980522T>C COSN9680663 AOCS-166-1-2 [ovary][NS][other][neoplasm]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-7112-3p tagGTGATGCtcctc UGCAUCAC m7b Disrupted HHFKP_139194_cluster-22413_1_32

*By default, only target sites identified by TargetScan are displayed. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.

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