SomamiR DB 2.0
Somatic mutations altering microRNA-ceRNA interactions
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PolymiRTS Database

Prediction criteria: TargetScan sites only     All 6mer or longer seed matches

Transcript ID: hsa_circ_0018167
Gene Symbol: PARD3
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Somatic mutations that impact miRNA target sites



Mutation Mutation ID Sample Name Cancer Type
chr10:g.34212046A>G COSN9205679 AOCS-115-1-0 [ovary][NS][other][neoplasm]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-2116-3p gaaatatATGGGAGc CCUCCCAU m7b Disrupted HHFCT_17471_cluster-2904_8_7
hsa-miR-188-3p gaaataTGTGGGAGc CUCCCACA m8a Created HHFCT_17471_cluster-2904_8_7
hsa-miR-532-3p gaaatatGTGGGAGc CCUCCCAC m7b Created HHFCT_17471_cluster-2904_8_7

Mutation Mutation ID Sample Name Cancer Type
chr10:g.34207381G>A COSN9205678 AOCS-142-3-5 [ovary][NS][other][neoplasm]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-155-3p gagagaTGTAGGAaa CUCCUACA m7b Disrupted HPSLC_2809_G3306.1_34496330
hsa-miR-3685 gagagatGTAGGAAa UUUCCUAC m7b Disrupted HPSLC_2809_G3306.1_34496330
hsa-miR-337-3p gagagaTATAGGAaa CUCCUAUA m7b Created HPSLC_2809_G3306.1_34496330
hsa-miR-202-5p gagagatATAGGAAa UUCCUAUG m7a Created HPSLC_2809_G3306.1_34496330

Mutation Mutation ID Sample Name Cancer Type
chr10:g.34131547G>A COSM3686724 TCGA-AM-5820-01 [large_intestine][colon][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-4999-5p ggATACAGCgtctga UGCUGUAU m7b (m7b->m6b) HHFKP_16615_cluster-2904_1_6

Mutation Mutation ID Sample Name Cancer Type
chr10:g.34131545G>A COSM125129 HN_63039 [upper_aerodigestive_tract][head_neck][carcinoma][squamous_cell_carcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-4330 atacagcATCTGAGg CCUCAGAU m7b Created HHFKP_16615_cluster-2904_1_6

Mutation Mutation ID Sample Name Cancer Type
chr10:g.34131513G>A COSM224367 ME011T [skin][extremity][malignant_melanoma][NS]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-1250-3p aaagcAAAATGaaga ACAUUUUC m6b Created HHFKP_16615_cluster-2904_1_6
hsa-miR-153-5p aaagcAAAATGAaga UCAUUUUU m7a Created HHFKP_16615_cluster-2904_1_6
hsa-miR-6885-3p aAAGCAAAatgaaga CUUUGCUU m7b Created HHFKP_16615_cluster-2904_1_6
hsa-miR-5696 aaagcaAAATGAaga CUCAUUUA m6b Created HHFKP_16615_cluster-2904_1_6
hsa-miR-452-3p aaagcaAGATGAaga CUCAUCUG m6b Disrupted HHFKP_16615_cluster-2904_1_6

*By default, only target sites identified by TargetScan are displayed. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.

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