SomamiR DB 2.0 Somatic mutations altering microRNA-ceRNA interactions |
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Transcript ID: | NM_001293557 |
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Gene Symbol: | NOD2 |
Browse Associations | |
Browse Pathways |
Mutation | Mutation ID | Sample Name | Cancer Type | ||
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chr16:g.50716613G>A | COSM3888619 | TCGA-FW-A3R5-06 | [skin][NS][malignant_melanoma][NS] | ||
miRNA Targets Table | |||||
miR ID | miRSite | miRSeed | SeedClass | FuncClass | Cluster ID |
hsa-miR-4312 | tcagacCAAGGCatc | GGCCUUGU | m6b | Created | HPCB3_8433_G11605.1_50750536 |
hsa-miR-4527 | tCAGACCAaggcatc | UGGUCUGC | m7a | Created | HPCB3_8433_G11605.1_50750536 |
hsa-miR-532-5p | tcagaccAAGGCATc | CAUGCCUU | m7b | Created | HPCB3_8433_G11605.1_50750536 |
hsa-miR-6753-3p | tCAGACCAaggcatc | UGGUCUGU | m7a | Created | HPCB3_8433_G11605.1_50750536 |
hsa-miR-6843-3p | tcAGACCAaggcatc | AUGGUCUC | m6b | Created | HPCB3_8433_G11605.1_50750536 |
hsa-miR-6848-3p | tcAGACCAaggcatc | GUGGUCUC | m6b | Created | HPCB3_8433_G11605.1_50750536 |
hsa-miR-7107-3p | tCAGACCAaggcatc | UGGUCUGU | m7a | Created | HPCB3_8433_G11605.1_50750536 |
Mutation | Mutation ID | Sample Name | Cancer Type | ||
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chr16:g.50716612C>T | COSM4481139 | CSCC-52-T | [skin][head_neck][carcinoma][squamous_cell_carcinoma] | ||
miRNA Targets Table | |||||
miR ID | miRSite | miRSeed | SeedClass | FuncClass | Cluster ID |
hsa-miR-4264 | ctcaGACTGAGgcat | ACUCAGUC | m7b | Created | HPCB3_8433_G11605.1_50750536 |
hsa-miR-622 | ctCAGACTGaggcat | ACAGUCUG | m7b | (m6b->m7b) | HPCB3_8433_G11605.1_50750536 |