SomamiR DB 2.0
Somatic mutations altering microRNA-ceRNA interactions
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PolymiRTS Database

Prediction criteria: TargetScan sites only     All 6mer or longer seed matches

Transcript ID: NM_006157
Gene Symbol: NELL1
Browse Associations

Somatic mutations that impact miRNA target sites



Mutation Mutation ID Sample Name Cancer Type
chr11:g.21383776C>T COSN8438720 AOCS-034-3-8 [ovary][NS][other][neoplasm]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-8083 aatAGTCCTGatttt CAGGACUU m7a Disrupted HHFCT_28176_cluster-3394_3_10
hsa-miR-551b-5p aatagtcTTGATTTt GAAAUCAA m7b Created HHFCT_28176_cluster-3394_3_10
hsa-miR-8083 aatAGTCCTGatttt CAGGACUU m7a Disrupted HHFKP_26960_cluster-3394_4_11
hsa-miR-551b-5p aatagtcTTGATTTt GAAAUCAA m7b Created HHFKP_26960_cluster-3394_4_11
hsa-miR-4759 aaTAGTCCTgatttt UAGGACUA m7b (m7b->m6b) HHFCT_28176_cluster-3394_3_10
hsa-miR-4759 aaTAGTCCTgatttt UAGGACUA m7b (m7b->m6b) HHFKP_26960_cluster-3394_4_11
hsa-miR-4436a aataGTCCTGatttt GCAGGACA m6b Disrupted HHFKP_26960_cluster-3394_4_11
hsa-miR-4436a aataGTCCTGatttt GCAGGACA m6b Disrupted HHFCT_28176_cluster-3394_3_10

Mutation Mutation ID Sample Name Cancer Type
chr11:g.21326068A>C COSN6997937 8057726 [pancreas][NS][carcinoma][NS]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-129-5p aaaaaaaCAAAAAaa CUUUUUGC m6b Created HHRBL_2508_BCBL1-2of3-SCL_15655

Mutation Mutation ID Sample Name Cancer Type
chr11:g.21326064A>C COSN6997936 8057726 [pancreas][NS][carcinoma][NS]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-129-5p aaaaaaaCAAAAAaa CUUUUUGC m6b Created HHRBL_2508_BCBL1-2of3-SCL_15655

Mutation Mutation ID Sample Name Cancer Type
chr11:g.21326063A>C COSN6997935 8015259 [pancreas][NS][carcinoma][NS]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-129-5p aaaaaaaCAAAAAaa CUUUUUGC m6b Created HHRBL_2508_BCBL1-2of3-SCL_15655

Mutation Mutation ID Sample Name Cancer Type
chr11:g.21326060A>C COSN6997934 8057726 [pancreas][NS][carcinoma][NS]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-129-5p aaaaaaaCAAAAAaa CUUUUUGC m6b Created HHRBL_2508_BCBL1-2of3-SCL_15655

*By default, only target sites identified by TargetScan are displayed. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.

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