SomamiR DB 2.0
Somatic mutations altering microRNA-ceRNA interactions
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PolymiRTS Database
Prediction criteria: TargetScan sites only     All 6mer or longer seed matches
Transcript ID: hsa_circ_0071469
Gene Symbol: NEIL3
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Somatic mutations that impact miRNA target sites


Mutation Mutation ID Sample Name Cancer Type
chr4:g.177336283G>A COSM3602206 TCGA-EE-A3AC-06 [skin][NS][malignant_melanoma][NS]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-153-5p cAAAAATGAagctct UCAUUUUU m8a (m8a->m7a) HHFCT_121269_cluster-17421_4_26
hsa-miR-5696 caaAAATGAagctct CUCAUUUA m6b Disrupted HHFCT_121269_cluster-17421_4_26
hsa-miR-1250-3p caAAAATGaagctct ACAUUUUC m6b Disrupted HPRT3_19044_G25426.1_178257436
hsa-miR-153-5p cAAAAATGAagctct UCAUUUUU m8a (m8a->m7a) HPRT3_19044_G25426.1_178257436
hsa-miR-5696 caaAAATGAagctct CUCAUUUA m6b Disrupted HPRT3_19044_G25426.1_178257436
hsa-miR-1250-3p caAAAATGaagctct ACAUUUUC m6b Disrupted HHFCT_121269_cluster-17421_4_26
hsa-miR-153-5p cAAAAATGAagctct UCAUUUUU m8a (m8a->m7a) HHFCT_121269_cluster-17421_4_26
hsa-miR-5696 caaAAATGAagctct CUCAUUUA m6b Disrupted HHFCT_121269_cluster-17421_4_26
hsa-miR-1250-3p caAAAATGaagctct ACAUUUUC m6b Disrupted HPRT3_19044_G25426.1_178257436
hsa-miR-153-5p cAAAAATGAagctct UCAUUUUU m8a (m8a->m7a) HPRT3_19044_G25426.1_178257436
hsa-miR-5696 caaAAATGAagctct CUCAUUUA m6b Disrupted HPRT3_19044_G25426.1_178257436

Mutation Mutation ID Sample Name Cancer Type
chr4:g.177336266G>T COSM1650232 TCGA-49-4506-01 [lung][NS][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-3162-3p ggaGTAGGGAacatc UCCCUACC m7a Disrupted HHFCT_121269_cluster-17421_4_26
hsa-miR-4999-3p ggaGTAGTGAacatc UCACUACC m7a Created HHFCT_121269_cluster-17421_4_26
hsa-miR-642b-5p ggagtAGGGAACatc GGUUCCCU m7b Disrupted HHFCT_121269_cluster-17421_4_26
hsa-miR-3162-3p ggaGTAGGGAacatc UCCCUACC m7a Disrupted HHFCT_121269_cluster-17421_4_26
hsa-miR-4999-3p ggaGTAGTGAacatc UCACUACC m7a Created HHFCT_121269_cluster-17421_4_26
hsa-miR-642b-5p ggagtAGGGAACatc GGUUCCCU m7b Disrupted HHFCT_121269_cluster-17421_4_26

Mutation Mutation ID Sample Name Cancer Type
chr4:g.177336229G>A COSM4997636 Sample_1 [large_intestine][NS][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-323a-3p gctagGTAATGTGct CACAUUAC m8a Created HHFCT_121269_cluster-17421_4_26
hsa-miR-499a-3p gctagGTGATGTgct AACAUCAC m7b Disrupted HHFCT_121269_cluster-17421_4_26
hsa-miR-499b-3p gctagGTGATGTgct AACAUCAC m7b Disrupted HHFCT_121269_cluster-17421_4_26
hsa-miR-323a-3p gctagGTAATGTGct CACAUUAC m8a Created HHFCT_121269_cluster-17421_4_26
hsa-miR-499a-3p gctagGTGATGTgct AACAUCAC m7b Disrupted HHFCT_121269_cluster-17421_4_26
hsa-miR-499b-3p gctagGTGATGTgct AACAUCAC m7b Disrupted HHFCT_121269_cluster-17421_4_26

Mutation Mutation ID Sample Name Cancer Type
chr4:g.177336219G>C COSM1650233 TCGA-73-4670-01 [lung][NS][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-6850-3p aaGGCCGGatgctag CCCGGCCG m6b Disrupted HHFCT_121269_cluster-17421_4_26
hsa-miR-6850-3p aaGGCCGGatgctag CCCGGCCG m6b Disrupted HHFCT_121269_cluster-17421_4_26

*By default, only target sites identified by TargetScan are displayed. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.

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