Mutation
|
Mutation ID
|
Sample Name
|
Cancer Type
|
chr4:g.177322521C>T
|
COSM4945301
|
62
|
[central_nervous_system][brain][glioma][oligoastrocytoma_Grade_III]
|
miRNA Targets Table
|
miR ID |
miRSite |
miRSeed |
SeedClass |
FuncClass |
Cluster ID |
hsa-miR-30a-5p |
aTGTTTACAgtggcg |
UGUAAACA |
m8a |
(m8a->m7a) |
HHFCT_121268_cluster-17421_3_28 |
hsa-miR-30b-5p |
aTGTTTACAgtggcg |
UGUAAACA |
m8a |
(m8a->m7a) |
HHFCT_121268_cluster-17421_3_28 |
hsa-miR-30c-5p |
aTGTTTACAgtggcg |
UGUAAACA |
m8a |
(m8a->m7a) |
HHFCT_121268_cluster-17421_3_28 |
hsa-miR-30d-5p |
aTGTTTACAgtggcg |
UGUAAACA |
m8a |
(m8a->m7a) |
HHFCT_121268_cluster-17421_3_28 |
hsa-miR-30e-5p |
aTGTTTACAgtggcg |
UGUAAACA |
m8a |
(m8a->m7a) |
HHFCT_121268_cluster-17421_3_28 |
hsa-miR-3607-3p |
atgTTTACAGTggcg |
ACUGUAAA |
m8a |
Disrupted |
HHFCT_121268_cluster-17421_3_28 |
hsa-miR-4252 |
atgtttaCAGTGGCg |
GGCCACUG |
m7b |
Disrupted |
HHFCT_121268_cluster-17421_3_28 |
hsa-miR-30a-5p |
aTGTTTACAgtggcg |
UGUAAACA |
m8a |
(m8a->m7a) |
HHFKP_112035_cluster-17421_1_33 |
hsa-miR-30b-5p |
aTGTTTACAgtggcg |
UGUAAACA |
m8a |
(m8a->m7a) |
HHFKP_112035_cluster-17421_1_33 |
hsa-miR-30c-5p |
aTGTTTACAgtggcg |
UGUAAACA |
m8a |
(m8a->m7a) |
HHFKP_112035_cluster-17421_1_33 |
hsa-miR-30d-5p |
aTGTTTACAgtggcg |
UGUAAACA |
m8a |
(m8a->m7a) |
HHFKP_112035_cluster-17421_1_33 |
hsa-miR-30e-5p |
aTGTTTACAgtggcg |
UGUAAACA |
m8a |
(m8a->m7a) |
HHFKP_112035_cluster-17421_1_33 |
hsa-miR-3607-3p |
atgTTTACAGTggcg |
ACUGUAAA |
m8a |
Disrupted |
HHFKP_112035_cluster-17421_1_33 |
hsa-miR-4252 |
atgtttaCAGTGGCg |
GGCCACUG |
m7b |
Disrupted |
HHFKP_112035_cluster-17421_1_33 |
hsa-miR-30a-5p |
aTGTTTACAgtggcg |
UGUAAACA |
m8a |
(m8a->m7a) |
HHHNA_17597_NEIL3|NM_018248|exon_CDS|-4.28104790428546|0.0887060858196888 |
hsa-miR-30b-5p |
aTGTTTACAgtggcg |
UGUAAACA |
m8a |
(m8a->m7a) |
HHHNA_17597_NEIL3|NM_018248|exon_CDS|-4.28104790428546|0.0887060858196888 |
hsa-miR-30c-5p |
aTGTTTACAgtggcg |
UGUAAACA |
m8a |
(m8a->m7a) |
HHHNA_17597_NEIL3|NM_018248|exon_CDS|-4.28104790428546|0.0887060858196888 |
hsa-miR-30d-5p |
aTGTTTACAgtggcg |
UGUAAACA |
m8a |
(m8a->m7a) |
HHHNA_17597_NEIL3|NM_018248|exon_CDS|-4.28104790428546|0.0887060858196888 |
hsa-miR-30e-5p |
aTGTTTACAgtggcg |
UGUAAACA |
m8a |
(m8a->m7a) |
HHHNA_17597_NEIL3|NM_018248|exon_CDS|-4.28104790428546|0.0887060858196888 |
hsa-miR-3607-3p |
atgTTTACAGTggcg |
ACUGUAAA |
m8a |
Disrupted |
HHHNA_17597_NEIL3|NM_018248|exon_CDS|-4.28104790428546|0.0887060858196888 |
hsa-miR-4252 |
atgtttaCAGTGGCg |
GGCCACUG |
m7b |
Disrupted |
HHHNA_17597_NEIL3|NM_018248|exon_CDS|-4.28104790428546|0.0887060858196888 |
hsa-miR-30a-5p |
aTGTTTACAgtggcg |
UGUAAACA |
m8a |
(m8a->m7a) |
HHHSA_17597_NEIL3|NM_018248|exon_CDS|-4.28104790428546|0.0887060858196888 |
hsa-miR-30b-5p |
aTGTTTACAgtggcg |
UGUAAACA |
m8a |
(m8a->m7a) |
HHHSA_17597_NEIL3|NM_018248|exon_CDS|-4.28104790428546|0.0887060858196888 |
hsa-miR-30c-5p |
aTGTTTACAgtggcg |
UGUAAACA |
m8a |
(m8a->m7a) |
HHHSA_17597_NEIL3|NM_018248|exon_CDS|-4.28104790428546|0.0887060858196888 |
hsa-miR-30d-5p |
aTGTTTACAgtggcg |
UGUAAACA |
m8a |
(m8a->m7a) |
HHHSA_17597_NEIL3|NM_018248|exon_CDS|-4.28104790428546|0.0887060858196888 |
hsa-miR-30e-5p |
aTGTTTACAgtggcg |
UGUAAACA |
m8a |
(m8a->m7a) |
HHHSA_17597_NEIL3|NM_018248|exon_CDS|-4.28104790428546|0.0887060858196888 |
hsa-miR-3607-3p |
atgTTTACAGTggcg |
ACUGUAAA |
m8a |
Disrupted |
HHHSA_17597_NEIL3|NM_018248|exon_CDS|-4.28104790428546|0.0887060858196888 |
hsa-miR-4252 |
atgtttaCAGTGGCg |
GGCCACUG |
m7b |
Disrupted |
HHHSA_17597_NEIL3|NM_018248|exon_CDS|-4.28104790428546|0.0887060858196888 |
hsa-miR-30a-5p |
aTGTTTACAgtggcg |
UGUAAACA |
m8a |
(m8a->m7a) |
HHFCT_121268_cluster-17421_3_28 |
hsa-miR-30b-5p |
aTGTTTACAgtggcg |
UGUAAACA |
m8a |
(m8a->m7a) |
HHFCT_121268_cluster-17421_3_28 |
hsa-miR-30c-5p |
aTGTTTACAgtggcg |
UGUAAACA |
m8a |
(m8a->m7a) |
HHFCT_121268_cluster-17421_3_28 |
hsa-miR-30d-5p |
aTGTTTACAgtggcg |
UGUAAACA |
m8a |
(m8a->m7a) |
HHFCT_121268_cluster-17421_3_28 |
hsa-miR-30e-5p |
aTGTTTACAgtggcg |
UGUAAACA |
m8a |
(m8a->m7a) |
HHFCT_121268_cluster-17421_3_28 |
hsa-miR-3607-3p |
atgTTTACAGTggcg |
ACUGUAAA |
m8a |
Disrupted |
HHFCT_121268_cluster-17421_3_28 |
hsa-miR-4252 |
atgtttaCAGTGGCg |
GGCCACUG |
m7b |
Disrupted |
HHFCT_121268_cluster-17421_3_28 |
hsa-miR-30a-5p |
aTGTTTACAgtggcg |
UGUAAACA |
m8a |
(m8a->m7a) |
HHFKP_112035_cluster-17421_1_33 |
hsa-miR-30b-5p |
aTGTTTACAgtggcg |
UGUAAACA |
m8a |
(m8a->m7a) |
HHFKP_112035_cluster-17421_1_33 |
hsa-miR-30c-5p |
aTGTTTACAgtggcg |
UGUAAACA |
m8a |
(m8a->m7a) |
HHFKP_112035_cluster-17421_1_33 |
hsa-miR-30d-5p |
aTGTTTACAgtggcg |
UGUAAACA |
m8a |
(m8a->m7a) |
HHFKP_112035_cluster-17421_1_33 |
hsa-miR-30e-5p |
aTGTTTACAgtggcg |
UGUAAACA |
m8a |
(m8a->m7a) |
HHFKP_112035_cluster-17421_1_33 |
hsa-miR-3607-3p |
atgTTTACAGTggcg |
ACUGUAAA |
m8a |
Disrupted |
HHFKP_112035_cluster-17421_1_33 |
hsa-miR-4252 |
atgtttaCAGTGGCg |
GGCCACUG |
m7b |
Disrupted |
HHFKP_112035_cluster-17421_1_33 |
hsa-miR-30a-5p |
aTGTTTACAgtggcg |
UGUAAACA |
m8a |
(m8a->m7a) |
HHHNA_17597_NEIL3|NM_018248|exon_CDS|-4.28104790428546|0.0887060858196888 |
hsa-miR-30b-5p |
aTGTTTACAgtggcg |
UGUAAACA |
m8a |
(m8a->m7a) |
HHHNA_17597_NEIL3|NM_018248|exon_CDS|-4.28104790428546|0.0887060858196888 |
hsa-miR-30c-5p |
aTGTTTACAgtggcg |
UGUAAACA |
m8a |
(m8a->m7a) |
HHHNA_17597_NEIL3|NM_018248|exon_CDS|-4.28104790428546|0.0887060858196888 |
hsa-miR-30d-5p |
aTGTTTACAgtggcg |
UGUAAACA |
m8a |
(m8a->m7a) |
HHHNA_17597_NEIL3|NM_018248|exon_CDS|-4.28104790428546|0.0887060858196888 |
hsa-miR-30e-5p |
aTGTTTACAgtggcg |
UGUAAACA |
m8a |
(m8a->m7a) |
HHHNA_17597_NEIL3|NM_018248|exon_CDS|-4.28104790428546|0.0887060858196888 |
hsa-miR-3607-3p |
atgTTTACAGTggcg |
ACUGUAAA |
m8a |
Disrupted |
HHHNA_17597_NEIL3|NM_018248|exon_CDS|-4.28104790428546|0.0887060858196888 |
hsa-miR-4252 |
atgtttaCAGTGGCg |
GGCCACUG |
m7b |
Disrupted |
HHHNA_17597_NEIL3|NM_018248|exon_CDS|-4.28104790428546|0.0887060858196888 |
hsa-miR-30a-5p |
aTGTTTACAgtggcg |
UGUAAACA |
m8a |
(m8a->m7a) |
HHHSA_17597_NEIL3|NM_018248|exon_CDS|-4.28104790428546|0.0887060858196888 |
hsa-miR-30b-5p |
aTGTTTACAgtggcg |
UGUAAACA |
m8a |
(m8a->m7a) |
HHHSA_17597_NEIL3|NM_018248|exon_CDS|-4.28104790428546|0.0887060858196888 |
hsa-miR-30c-5p |
aTGTTTACAgtggcg |
UGUAAACA |
m8a |
(m8a->m7a) |
HHHSA_17597_NEIL3|NM_018248|exon_CDS|-4.28104790428546|0.0887060858196888 |
hsa-miR-30d-5p |
aTGTTTACAgtggcg |
UGUAAACA |
m8a |
(m8a->m7a) |
HHHSA_17597_NEIL3|NM_018248|exon_CDS|-4.28104790428546|0.0887060858196888 |
hsa-miR-30e-5p |
aTGTTTACAgtggcg |
UGUAAACA |
m8a |
(m8a->m7a) |
HHHSA_17597_NEIL3|NM_018248|exon_CDS|-4.28104790428546|0.0887060858196888 |
hsa-miR-3607-3p |
atgTTTACAGTggcg |
ACUGUAAA |
m8a |
Disrupted |
HHHSA_17597_NEIL3|NM_018248|exon_CDS|-4.28104790428546|0.0887060858196888 |
hsa-miR-4252 |
atgtttaCAGTGGCg |
GGCCACUG |
m7b |
Disrupted |
HHHSA_17597_NEIL3|NM_018248|exon_CDS|-4.28104790428546|0.0887060858196888 |
Mutation
|
Mutation ID
|
Sample Name
|
Cancer Type
|
chr4:g.177322499G>T
|
COSM334584
|
LUAD-B01811
|
[lung][NS][carcinoma][adenocarcinoma]
|
miRNA Targets Table
|
miR ID |
miRSite |
miRSeed |
SeedClass |
FuncClass |
Cluster ID |
hsa-miR-3155a |
gtcttGAGCCTGttt |
CCAGGCUC |
m7b |
Disrupted |
HHFCT_121268_cluster-17421_3_28 |
hsa-miR-3155b |
gtcttGAGCCTGttt |
CCAGGCUC |
m7b |
Disrupted |
HHFCT_121268_cluster-17421_3_28 |
hsa-miR-4438 |
gtcttgAGCCTGTtt |
CACAGGCU |
m7b |
Disrupted |
HHFCT_121268_cluster-17421_3_28 |
hsa-miR-484 |
gtcttGAGCCTGttt |
UCAGGCUC |
m7b |
Disrupted |
HHFCT_121268_cluster-17421_3_28 |
hsa-miR-3155a |
gtcttGAGCCTGttt |
CCAGGCUC |
m7b |
Disrupted |
HHFKP_112035_cluster-17421_1_33 |
hsa-miR-3155b |
gtcttGAGCCTGttt |
CCAGGCUC |
m7b |
Disrupted |
HHFKP_112035_cluster-17421_1_33 |
hsa-miR-4438 |
gtcttgAGCCTGTtt |
CACAGGCU |
m7b |
Disrupted |
HHFKP_112035_cluster-17421_1_33 |
hsa-miR-484 |
gtcttGAGCCTGttt |
UCAGGCUC |
m7b |
Disrupted |
HHFKP_112035_cluster-17421_1_33 |
Mutation
|
Mutation ID
|
Sample Name
|
Cancer Type
|
chr4:g.177322486C>T
|
COSM1053452
|
TCGA-AX-A064-01
|
[endometrium][NS][carcinoma][endometrioid_carcinoma]
|
miRNA Targets Table
|
miR ID |
miRSite |
miRSeed |
SeedClass |
FuncClass |
Cluster ID |
hsa-miR-1287-3p |
ttccaGCTAGAatgt |
CUCUAGCC |
m6b |
Created |
HHFCT_121268_cluster-17421_3_28 |
hsa-miR-149-5p |
ttccAGCCAGAatgt |
UCUGGCUC |
m7a |
Disrupted |
HHFCT_121268_cluster-17421_3_28 |
hsa-miR-3064-5p |
ttcCAGCCAGAatgt |
UCUGGCUG |
m8a |
Disrupted |
HHFCT_121268_cluster-17421_3_28 |
hsa-miR-4430 |
tTCCAGCCagaatgt |
AGGCUGGA |
m7b |
Disrupted |
HHFCT_121268_cluster-17421_3_28 |
hsa-miR-4794 |
ttccAGCCAGAatgt |
UCUGGCUA |
m7a |
Disrupted |
HHFCT_121268_cluster-17421_3_28 |
hsa-miR-5787 |
ttCCAGCCagaatgt |
GGGCUGGG |
m6b |
Disrupted |
HHFCT_121268_cluster-17421_3_28 |
hsa-miR-6504-5p |
ttcCAGCCAGAatgt |
UCUGGCUG |
m8a |
Disrupted |
HHFCT_121268_cluster-17421_3_28 |
hsa-miR-664a-5p |
ttccAGCCAGaatgt |
ACUGGCUA |
m6b |
Disrupted |
HHFCT_121268_cluster-17421_3_28 |
hsa-miR-6842-3p |
ttCCAGCCAgaatgt |
UUGGCUGG |
m7b |
(m7b->m6b) |
HHFCT_121268_cluster-17421_3_28 |
hsa-miR-1287-3p |
ttccaGCTAGAatgt |
CUCUAGCC |
m6b |
Created |
HHFKP_112035_cluster-17421_1_33 |
hsa-miR-149-5p |
ttccAGCCAGAatgt |
UCUGGCUC |
m7a |
Disrupted |
HHFKP_112035_cluster-17421_1_33 |
hsa-miR-3064-5p |
ttcCAGCCAGAatgt |
UCUGGCUG |
m8a |
Disrupted |
HHFKP_112035_cluster-17421_1_33 |
hsa-miR-4430 |
tTCCAGCCagaatgt |
AGGCUGGA |
m7b |
Disrupted |
HHFKP_112035_cluster-17421_1_33 |
hsa-miR-4794 |
ttccAGCCAGAatgt |
UCUGGCUA |
m7a |
Disrupted |
HHFKP_112035_cluster-17421_1_33 |
hsa-miR-5787 |
ttCCAGCCagaatgt |
GGGCUGGG |
m6b |
Disrupted |
HHFKP_112035_cluster-17421_1_33 |
hsa-miR-6504-5p |
ttcCAGCCAGAatgt |
UCUGGCUG |
m8a |
Disrupted |
HHFKP_112035_cluster-17421_1_33 |
hsa-miR-664a-5p |
ttccAGCCAGaatgt |
ACUGGCUA |
m6b |
Disrupted |
HHFKP_112035_cluster-17421_1_33 |
hsa-miR-6842-3p |
ttCCAGCCAgaatgt |
UUGGCUGG |
m7b |
(m7b->m6b) |
HHFKP_112035_cluster-17421_1_33 |
Mutation
|
Mutation ID
|
Sample Name
|
Cancer Type
|
chr4:g.177322462G>T
|
COSM1539833
|
TCGA-55-6985-01
|
[lung][right_upper_lobe][carcinoma][adenocarcinoma]
|
miRNA Targets Table
|
miR ID |
miRSite |
miRSeed |
SeedClass |
FuncClass |
Cluster ID |
hsa-miR-298 |
ctaggCTTCTGCact |
AGCAGAAG |
m7b |
Created |
HHHNE_12175_NEIL3|NM_018248|exon_CDS|-5.32807992590588|-1.629348741322 |
hsa-miR-3944-5p |
ctaggctGCTGCACt |
UGUGCAGC |
m7b |
Disrupted |
HHHNE_12175_NEIL3|NM_018248|exon_CDS|-5.32807992590588|-1.629348741322 |
hsa-miR-761 |
ctaggCTGCTGCact |
GCAGCAGG |
m7a |
Disrupted |
HHHNE_12175_NEIL3|NM_018248|exon_CDS|-5.32807992590588|-1.629348741322 |
hsa-miR-922 |
ctaggCTGCTGCact |
GCAGCAGA |
m7a |
Disrupted |
HHHNE_12175_NEIL3|NM_018248|exon_CDS|-5.32807992590588|-1.629348741322 |
hsa-miR-298 |
ctaggCTTCTGCact |
AGCAGAAG |
m7b |
Created |
HHHSE_12175_NEIL3|NM_018248|exon_CDS|-5.32807992590588|-1.629348741322 |
hsa-miR-3944-5p |
ctaggctGCTGCACt |
UGUGCAGC |
m7b |
Disrupted |
HHHSE_12175_NEIL3|NM_018248|exon_CDS|-5.32807992590588|-1.629348741322 |
hsa-miR-761 |
ctaggCTGCTGCact |
GCAGCAGG |
m7a |
Disrupted |
HHHSE_12175_NEIL3|NM_018248|exon_CDS|-5.32807992590588|-1.629348741322 |
hsa-miR-922 |
ctaggCTGCTGCact |
GCAGCAGA |
m7a |
Disrupted |
HHHSE_12175_NEIL3|NM_018248|exon_CDS|-5.32807992590588|-1.629348741322 |
*By default, only target sites identified by TargetScan are displayed. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.