SomamiR DB 2.0
Somatic mutations altering microRNA-ceRNA interactions
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PolymiRTS Database
Prediction criteria: TargetScan sites only     All 6mer or longer seed matches
Transcript ID: NM_001284339
Gene Symbol: NEDD4
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Browse Pathways

Somatic mutations that impact miRNA target sites

Mutation Mutation ID Sample Name Cancer Type
chr15:g.55890441A>G COSN6276360 RK162_C01 [liver][NS][carcinoma][NS]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
No TargetScan sites are altered. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.


Mutation Mutation ID Sample Name Cancer Type
chr15:g.55829992C>T COSM224485 ME011T [skin][extremity][malignant_melanoma][NS]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-4645-5p ttttaatTGCCTGGa ACCAGGCA m7b Created HPRT3_9468_G12455.1_56122194
hsa-miR-4673 ttttaatTGCCTGGa UCCAGGCA m7b Created HPRT3_9468_G12455.1_56122194
hsa-miR-4742-5p ttttaaTTGCCTGga UCAGGCAA m7b Created HPRT3_9468_G12455.1_56122194
hsa-miR-8053 ttttAATCGCCtgga UGGCGAUU m7b Disrupted HPRT3_9468_G12455.1_56122194
hsa-miR-4645-5p ttttaatTGCCTGGa ACCAGGCA m7b Created HPRT3_9468_G12455.1_56122194
hsa-miR-4673 ttttaatTGCCTGGa UCCAGGCA m7b Created HPRT3_9468_G12455.1_56122194
hsa-miR-4742-5p ttttaaTTGCCTGga UCAGGCAA m7b Created HPRT3_9468_G12455.1_56122194
hsa-miR-8053 ttttAATCGCCtgga UGGCGAUU m7b Disrupted HPRT3_9468_G12455.1_56122194

Mutation Mutation ID Sample Name Cancer Type
chr15:g.55829991G>A COSM191598 TCGA-AA-3947-01 [large_intestine][colon][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-125a-3p tttaaTCACCTGgac ACAGGUGA m7b Created HPRT3_9468_G12455.1_56122194
hsa-miR-4645-5p tttaatcGCCTGGac ACCAGGCA m6b Disrupted HPRT3_9468_G12455.1_56122194
hsa-miR-8053 tttAATCGCCtggac UGGCGAUU m7b Disrupted HPRT3_9468_G12455.1_56122194

Mutation Mutation ID Sample Name Cancer Type
chr15:g.55829938A>T COSM124714 HN_0-046 [upper_aerodigestive_tract][mouth][carcinoma][squamous_cell_carcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-192-3p acttcagTTGGCAat CUGCCAAU m6b Created HHFCT_50405_cluster-7963_28_16
hsa-miR-4659a-5p acttcagATGGCAat CUGCCAUG m6b Disrupted HHFCT_50405_cluster-7963_28_16
hsa-miR-4776-3p acttcagATGGCAAt CUUGCCAU m7b Disrupted HHFCT_50405_cluster-7963_28_16
hsa-miR-5189-3p acttcaGTTGGCAat UGCCAACC m7a Created HHFCT_50405_cluster-7963_28_16

Mutation Mutation ID Sample Name Cancer Type
chr15:g.55829425A>G COSN8590170 4537_T [lung][NS][carcinoma][squamous_cell_carcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-421 ctttaCTGTTGAgta AUCAACAG m7b Created HHFCT_50401_cluster-7963_20_102
hsa-miR-4709-5p ctttACTGTTGagta ACAACAGU m7b Created HHFCT_50401_cluster-7963_20_102

Mutation Mutation ID Sample Name Cancer Type
chr15:g.55829413A>G COSN8747543 AOCS-134-3-9 [ovary][NS][other][neoplasm]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-25-3p gtaaacTGCAATata CAUUGCAC m6b Created HHFCT_50401_cluster-7963_20_102
hsa-miR-363-3p gtaaacTGCAATata AAUUGCAC m6b Created HHFCT_50401_cluster-7963_20_102
hsa-miR-367-3p gtaaacTGCAATata AAUUGCAC m6b Created HHFCT_50401_cluster-7963_20_102
hsa-miR-3674 gtaaaCTACAATata AUUGUAGA m7a Disrupted HHFCT_50401_cluster-7963_20_102
hsa-miR-4703-3p gtaAACTACAatata UGUAGUUG m7a Disrupted HHFCT_50401_cluster-7963_20_102
hsa-miR-6516-5p gtaaACTGCAAtata UUUGCAGU m7b Created HHFCT_50401_cluster-7963_20_102
hsa-miR-25-3p gtaaacTGCAATata CAUUGCAC m6b Created HHFKP_48050_cluster-7963_16_107
hsa-miR-363-3p gtaaacTGCAATata AAUUGCAC m6b Created HHFKP_48050_cluster-7963_16_107
hsa-miR-367-3p gtaaacTGCAATata AAUUGCAC m6b Created HHFKP_48050_cluster-7963_16_107
hsa-miR-3674 gtaaaCTACAATata AUUGUAGA m7a Disrupted HHFKP_48050_cluster-7963_16_107
hsa-miR-4703-3p gtaAACTACAatata UGUAGUUG m7a Disrupted HHFKP_48050_cluster-7963_16_107
hsa-miR-6516-5p gtaaACTGCAAtata UUUGCAGU m7b Created HHFKP_48050_cluster-7963_16_107
hsa-miR-25-3p gtaaacTGCAATata CAUUGCAC m6b Created HPKTA_22039_G23741.1_56121597
hsa-miR-363-3p gtaaacTGCAATata AAUUGCAC m6b Created HPKTA_22039_G23741.1_56121597
hsa-miR-367-3p gtaaacTGCAATata AAUUGCAC m6b Created HPKTA_22039_G23741.1_56121597
hsa-miR-3674 gtaaaCTACAATata AUUGUAGA m7a Disrupted HPKTA_22039_G23741.1_56121597
hsa-miR-4703-3p gtaAACTACAatata UGUAGUUG m7a Disrupted HPKTA_22039_G23741.1_56121597
hsa-miR-6516-5p gtaaACTGCAAtata UUUGCAGU m7b Created HPKTA_22039_G23741.1_56121597

Mutation Mutation ID Sample Name Cancer Type
chr15:g.55829272A>G COSN1680189 RK049_C01 [liver][NS][carcinoma][NS]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-30a-5p acTGTTTACttcttc UGUAAACA m7b (m7b->m6b) HHFCT_50401_cluster-7963_20_102
hsa-miR-30b-5p acTGTTTACttcttc UGUAAACA m7b (m7b->m6b) HHFCT_50401_cluster-7963_20_102
hsa-miR-30c-5p acTGTTTACttcttc UGUAAACA m7b (m7b->m6b) HHFCT_50401_cluster-7963_20_102
hsa-miR-30d-5p acTGTTTACttcttc UGUAAACA m7b (m7b->m6b) HHFCT_50401_cluster-7963_20_102
hsa-miR-30e-5p acTGTTTACttcttc UGUAAACA m7b (m7b->m6b) HHFCT_50401_cluster-7963_20_102
hsa-miR-548ao-5p actgtTTACTTCTtc AGAAGUAA m8a Disrupted HHFCT_50401_cluster-7963_20_102
hsa-miR-548ax actgtTTACTTCTtc AGAAGUAA m8a Disrupted HHFCT_50401_cluster-7963_20_102
hsa-miR-30a-5p acTGTTTACttcttc UGUAAACA m7b (m7b->m6b) HHFKP_48049_cluster-7963_15_16
hsa-miR-30b-5p acTGTTTACttcttc UGUAAACA m7b (m7b->m6b) HHFKP_48049_cluster-7963_15_16
hsa-miR-30c-5p acTGTTTACttcttc UGUAAACA m7b (m7b->m6b) HHFKP_48049_cluster-7963_15_16
hsa-miR-30d-5p acTGTTTACttcttc UGUAAACA m7b (m7b->m6b) HHFKP_48049_cluster-7963_15_16
hsa-miR-30e-5p acTGTTTACttcttc UGUAAACA m7b (m7b->m6b) HHFKP_48049_cluster-7963_15_16
hsa-miR-548ao-5p actgtTTACTTCTtc AGAAGUAA m8a Disrupted HHFKP_48049_cluster-7963_15_16
hsa-miR-548ax actgtTTACTTCTtc AGAAGUAA m8a Disrupted HHFKP_48049_cluster-7963_15_16

Mutation Mutation ID Sample Name Cancer Type
chr15:g.55828987C>A COSN7049092 8034061 [pancreas][NS][carcinoma][NS]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-186-5p agatATTCTTTacac CAAAGAAU m7b Disrupted HHFCT_50398_cluster-7963_17_116
hsa-miR-5692a agatATTATTTacac CAAAUAAU m7b Created HHFCT_50398_cluster-7963_17_116
hsa-miR-5692b agATATTATTtacac AAUAAUAU m8a Created HHFCT_50398_cluster-7963_17_116
hsa-miR-5692c agATATTATTtacac AAUAAUAU m8a Created HHFCT_50398_cluster-7963_17_116
hsa-miR-6507-5p agaTATTCTTtacac GAAGAAUA m7b Disrupted HHFCT_50398_cluster-7963_17_116
hsa-miR-889-3p aGATATTAtttacac UUAAUAUC m7b Created HHFCT_50398_cluster-7963_17_116
hsa-miR-186-5p agatATTCTTTacac CAAAGAAU m7b Disrupted HHFKP_48047_cluster-7963_13_470
hsa-miR-5692a agatATTATTTacac CAAAUAAU m7b Created HHFKP_48047_cluster-7963_13_470
hsa-miR-5692b agATATTATTtacac AAUAAUAU m8a Created HHFKP_48047_cluster-7963_13_470
hsa-miR-5692c agATATTATTtacac AAUAAUAU m8a Created HHFKP_48047_cluster-7963_13_470
hsa-miR-6507-5p agaTATTCTTtacac GAAGAAUA m7b Disrupted HHFKP_48047_cluster-7963_13_470
hsa-miR-889-3p aGATATTAtttacac UUAAUAUC m7b Created HHFKP_48047_cluster-7963_13_470

Mutation Mutation ID Sample Name Cancer Type
chr15:g.55828887T>C COSN8747542 AOCS-149-1-7 [ovary][NS][other][neoplasm]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-4765 tttagtATCACTCta UGAGUGAU m7b Disrupted HHFCT_50398_cluster-7963_17_116
hsa-miR-5586-3p tttagtaTCACTCTa CAGAGUGA m7b Disrupted HHFCT_50398_cluster-7963_17_116
hsa-miR-4765 tttagtATCACTCta UGAGUGAU m7b Disrupted HHFKP_48047_cluster-7963_13_470
hsa-miR-5586-3p tttagtaTCACTCTa CAGAGUGA m7b Disrupted HHFKP_48047_cluster-7963_13_470

Mutation Mutation ID Sample Name Cancer Type
chr15:g.55827739T>C COSN5755460 HX33T [liver][NS][carcinoma][NS]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-190a-3p tattaaATATATAaa CUAUAUAU m7b Disrupted HHFKP_48038_cluster-7963_4_17
hsa-miR-4307 tattAAACATataaa AAUGUUUU m6b Created HHFKP_48038_cluster-7963_4_17
hsa-miR-5011-5p tattaaATATATAaa UAUAUAUA m7a Disrupted HHFKP_48038_cluster-7963_4_17

*By default, only target sites identified by TargetScan are displayed. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.

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