SomamiR DB 2.0
Somatic mutations altering microRNA-ceRNA interactions
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PolymiRTS Database
Prediction criteria: TargetScan sites only     All 6mer or longer seed matches
Transcript ID: hsa_circ_0060625
Gene Symbol: NCOA3
Browse Associations

Somatic mutations that impact miRNA target sites


Mutation Mutation ID Sample Name Cancer Type
chr20:g.47534403A>T COSN10016868 C0031T [kidney][NS][other][neoplasm]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-4704-5p atataaCTAGTGTtt GACACUAG m7b Created HHFCT_96636_cluster-14448_11_11
hsa-miR-6500-3p atataACAAGTGTtt ACACUUGU m8a Disrupted HHFCT_96636_cluster-14448_11_11

Mutation Mutation ID Sample Name Cancer Type
chr20:g.47524467G>C COSN7094642 8067180 [pancreas][NS][carcinoma][NS]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-3675-5p tttcctGCCCCATgc UAUGGGGC m7b Created HPRO6_48800_G57876.1_46153211
hsa-miR-4640-5p tttcCTGGCCCAtgc UGGGCCAG m8a Disrupted HPRO6_48800_G57876.1_46153211
hsa-miR-4726-5p tttcCTGGCCCatgc AGGGCCAG m7b Disrupted HPRO6_48800_G57876.1_46153211
hsa-miR-486-3p tttcCTGCCCCatgc CGGGGCAG m7b Created HPRO6_48800_G57876.1_46153211
hsa-miR-6721-5p tttCCTGCCCcatgc UGGGCAGG m7b Created HPRO6_48800_G57876.1_46153211
hsa-miR-3675-5p tttcctGCCCCATgc UAUGGGGC m7b Created HPTA3_11853_G18751.1_46153211
hsa-miR-4640-5p tttcCTGGCCCAtgc UGGGCCAG m8a Disrupted HPTA3_11853_G18751.1_46153211
hsa-miR-4726-5p tttcCTGGCCCatgc AGGGCCAG m7b Disrupted HPTA3_11853_G18751.1_46153211
hsa-miR-486-3p tttcCTGCCCCatgc CGGGGCAG m7b Created HPTA3_11853_G18751.1_46153211
hsa-miR-6721-5p tttCCTGCCCcatgc UGGGCAGG m7b Created HPTA3_11853_G18751.1_46153211
hsa-miR-3675-5p tttcctGCCCCATgc UAUGGGGC m7b Created HPTA4_2405_G10671.1_46153211
hsa-miR-4640-5p tttcCTGGCCCAtgc UGGGCCAG m8a Disrupted HPTA4_2405_G10671.1_46153211
hsa-miR-4726-5p tttcCTGGCCCatgc AGGGCCAG m7b Disrupted HPTA4_2405_G10671.1_46153211
hsa-miR-486-3p tttcCTGCCCCatgc CGGGGCAG m7b Created HPTA4_2405_G10671.1_46153211
hsa-miR-6721-5p tttCCTGCCCcatgc UGGGCAGG m7b Created HPTA4_2405_G10671.1_46153211

Mutation Mutation ID Sample Name Cancer Type
chr20:g.47505578C>G COSN4970328 SS6003305 [oesophagus][NS][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-548v agattacCTGTAGCa AGCUACAG m7b Disrupted HHFKP_89838_cluster-14448_2_292
hsa-miR-552-3p agattACCTGTagca AACAGGUG m6b Disrupted HHFKP_89838_cluster-14448_2_292

*By default, only target sites identified by TargetScan are displayed. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.

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