SomamiR DB 2.0
Somatic mutations altering microRNA-ceRNA interactions
  Home Search Help Download  

PolymiRTS Database
Prediction criteria: TargetScan sites only     All 6mer or longer seed matches
Transcript ID: hsa_circ_0056507
Gene Symbol: NCKAP5
Browse Associations

Somatic mutations that impact miRNA target sites


Mutation Mutation ID Sample Name Cancer Type
chr2:g.132725665G>T COSM1243427 ESO-081 [oesophagus][NS][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-3127-3p gctgGAAGGGGAcag UCCCCUUC m8a Disrupted HHFCT_83651_cluster-13916_15_9
hsa-miR-4433a-5p gctggaaTGGGACag CGUCCCAC m6b Created HHFCT_83651_cluster-13916_15_9
hsa-miR-4433b-5p gctggaaTGGGACAg AUGUCCCA m7b Created HHFCT_83651_cluster-13916_15_9
hsa-miR-6756-3p gctgGAAGGGGAcag UCCCCUUC m8a Disrupted HHFCT_83651_cluster-13916_15_9
hsa-miR-3127-3p gctgGAAGGGGAcag UCCCCUUC m8a Disrupted HHFCT_83651_cluster-13916_15_9
hsa-miR-4433a-5p gctggaaTGGGACag CGUCCCAC m6b Created HHFCT_83651_cluster-13916_15_9
hsa-miR-4433b-5p gctggaaTGGGACAg AUGUCCCA m7b Created HHFCT_83651_cluster-13916_15_9
hsa-miR-6756-3p gctgGAAGGGGAcag UCCCCUUC m8a Disrupted HHFCT_83651_cluster-13916_15_9

Mutation Mutation ID Sample Name Cancer Type
chr2:g.132725662G>A COSM3772439 8066467 [pancreas][NS][carcinoma][NS]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-3127-3p gGAAGGGGAcagtta UCCCCUUC m8a (m8a->m7a) HHFCT_83651_cluster-13916_15_9
hsa-miR-452-5p ggaagggAACAGTTa AACUGUUU m7a Created HHFCT_83651_cluster-13916_15_9
hsa-miR-4755-5p ggAAGGGAAcagtta UUUCCCUU m7b (m6b->m7b) HHFCT_83651_cluster-13916_15_9
hsa-miR-5006-3p ggAAGGGAAcagtta UUUCCCUU m7b (m6b->m7b) HHFCT_83651_cluster-13916_15_9
hsa-miR-5088-3p gGAAGGGAacagtta UCCCUUCU m7a Created HHFCT_83651_cluster-13916_15_9
hsa-miR-623 ggAAGGGAacagtta AUCCCUUG m6b Created HHFCT_83651_cluster-13916_15_9
hsa-miR-642b-5p ggaAGGGAACagtta GGUUCCCU m7b Created HHFCT_83651_cluster-13916_15_9
hsa-miR-6756-3p gGAAGGGGAcagtta UCCCCUUC m8a (m8a->m7a) HHFCT_83651_cluster-13916_15_9
hsa-miR-3127-3p gGAAGGGGAcagtta UCCCCUUC m8a (m8a->m7a) HHFCT_83651_cluster-13916_15_9
hsa-miR-452-5p ggaagggAACAGTTa AACUGUUU m7a Created HHFCT_83651_cluster-13916_15_9
hsa-miR-4755-5p ggAAGGGAAcagtta UUUCCCUU m7b (m6b->m7b) HHFCT_83651_cluster-13916_15_9
hsa-miR-5006-3p ggAAGGGAAcagtta UUUCCCUU m7b (m6b->m7b) HHFCT_83651_cluster-13916_15_9
hsa-miR-5088-3p gGAAGGGAacagtta UCCCUUCU m7a Created HHFCT_83651_cluster-13916_15_9
hsa-miR-623 ggAAGGGAacagtta AUCCCUUG m6b Created HHFCT_83651_cluster-13916_15_9
hsa-miR-642b-5p ggaAGGGAACagtta GGUUCCCU m7b Created HHFCT_83651_cluster-13916_15_9
hsa-miR-6756-3p gGAAGGGGAcagtta UCCCCUUC m8a (m8a->m7a) HHFCT_83651_cluster-13916_15_9

Mutation Mutation ID Sample Name Cancer Type
chr2:g.132725659A>C COSM3961150 3030_T [lung][NS][carcinoma][squamous_cell_carcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-4637 aggggacAGTTAGTg UACUAACU m7b Disrupted HHFCT_83651_cluster-13916_15_9
hsa-miR-4746-5p agGGGACCGttagtg CCGGUCCC m7b (m6b->m7b) HHFCT_83651_cluster-13916_15_9
hsa-miR-4637 aggggacAGTTAGTg UACUAACU m7b Disrupted HHFCT_83651_cluster-13916_15_9
hsa-miR-4746-5p agGGGACCGttagtg CCGGUCCC m7b (m6b->m7b) HHFCT_83651_cluster-13916_15_9

Mutation Mutation ID Sample Name Cancer Type
chr2:g.132725637C>T COSM1399437 TCGA-AA-3492-01 [large_intestine][colon][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-383-3p tgaagAGTGCTGccc ACAGCACU m7b Created HHFCT_83651_cluster-13916_15_9
hsa-miR-6812-3p tgAAGAGCGctgccc CCGCUCUU m7b (m7b->m6b) HHFCT_83651_cluster-13916_15_9
hsa-miR-885-3p tgaagagCGCTGCCc AGGCAGCG m7b Disrupted HHFCT_83651_cluster-13916_15_9
hsa-miR-383-3p tgaagAGTGCTGccc ACAGCACU m7b Created HHFCT_83651_cluster-13916_15_9
hsa-miR-6812-3p tgAAGAGCGctgccc CCGCUCUU m7b (m7b->m6b) HHFCT_83651_cluster-13916_15_9
hsa-miR-885-3p tgaagagCGCTGCCc AGGCAGCG m7b Disrupted HHFCT_83651_cluster-13916_15_9

*By default, only target sites identified by TargetScan are displayed. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.

Genome Browser