SomamiR DB 2.0
Somatic mutations altering microRNA-ceRNA interactions
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PolymiRTS Database

Prediction criteria: TargetScan sites only     All 6mer or longer seed matches

Transcript ID: NM_001024688
Gene Symbol: NBN
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Browse Pathways

Somatic mutations that impact miRNA target sites



Mutation Mutation ID Sample Name Cancer Type
chr8:g.89982789T>C COSM2790288 SNU-C1 [large_intestine][NS][other][neoplasm]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-2115-3p aTTCTGATtgaaaat CAUCAGAA m7b Disrupted HHFKP_139330_uc003yei.1_18_29
hsa-miR-30a-3p attctgACTGAAAat CUUUCAGU m7b Created HHFKP_139330_uc003yei.1_18_29
hsa-miR-30d-3p attctgACTGAAAat CUUUCAGU m7b Created HHFKP_139330_uc003yei.1_18_29
hsa-miR-30e-3p attctgACTGAAAat CUUUCAGU m7b Created HHFKP_139330_uc003yei.1_18_29
hsa-miR-34a-3p attCTGATTGaaaat CAAUCAGC m7a Disrupted HHFKP_139330_uc003yei.1_18_29
hsa-miR-4704-3p attcTGACTGAaaat UCAGUCAC m7a Created HHFKP_139330_uc003yei.1_18_29
hsa-miR-4705 attcTGATTGAaaat UCAAUCAC m7a Disrupted HHFKP_139330_uc003yei.1_18_29

Mutation Mutation ID Sample Name Cancer Type
chr8:g.89982786A>C COSM1314258 TCGA-G2-A2ES-01 [urinary_tract][bladder][carcinoma][NS]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-106a-3p ctgATTGCAaatgat CUGCAAUG m6b Created HHFKP_139330_uc003yei.1_18_29
hsa-miR-1250-3p ctgattGAAAATGat ACAUUUUC m7b Disrupted HHFKP_139330_uc003yei.1_18_29
hsa-miR-450b-5p ctgaTTGCAAAtgat UUUUGCAA m7b Created HHFKP_139330_uc003yei.1_18_29
hsa-miR-4705 cTGATTGAaaatgat UCAAUCAC m7a Disrupted HHFKP_139330_uc003yei.1_18_29
hsa-miR-579-3p ctgattgCAAATGAt UUCAUUUG m7b Created HHFKP_139330_uc003yei.1_18_29
hsa-miR-664b-3p ctgattgCAAATGAt UUCAUUUG m7b Created HHFKP_139330_uc003yei.1_18_29
Mutation Mutation ID Sample Name Cancer Type
chr8:g.89982770C>T COSM1330877 TCGA-13-2059-01 [ovary][NS][carcinoma][serous_carcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
No TargetScan sites are altered. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.


Mutation Mutation ID Sample Name Cancer Type
chr8:g.89982765G>A COSM1102344 TCGA-B5-A0JY-01 [endometrium][NS][carcinoma][endometrioid_carcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-647 atCAGCCAaaatcat GUGGCUGC m6b Created HHFKP_139330_uc003yei.1_18_29
hsa-miR-6842-3p atCAGCCAAaatcat UUGGCUGG m7a (m6a->m7a) HHFKP_139330_uc003yei.1_18_29

Mutation Mutation ID Sample Name Cancer Type
chr8:g.89982731A>T COSM1553464 TCGA-55-8089-01 [lung][right_upper_lobe][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-194-5p tttCTGTTACcaacc UGUAACAG m7b Created HHFCT_151090_uc003yei.1_24_8
hsa-miR-409-5p tttctGTAACCaacc AGGUUACC m6b Disrupted HHFCT_151090_uc003yei.1_24_8
hsa-miR-487a-5p tttctgTAACCAacc GUGGUUAU m6b Disrupted HHFCT_151090_uc003yei.1_24_8
hsa-miR-487b-5p tttctgTAACCAacc GUGGUUAU m6b Disrupted HHFCT_151090_uc003yei.1_24_8
hsa-miR-194-5p tttCTGTTACcaacc UGUAACAG m7b Created HPCB1_40322_G51553.1_90994965
hsa-miR-409-5p tttctGTAACCaacc AGGUUACC m6b Disrupted HPCB1_40322_G51553.1_90994965
hsa-miR-487a-5p tttctgTAACCAacc GUGGUUAU m6b Disrupted HPCB1_40322_G51553.1_90994965
hsa-miR-487b-5p tttctgTAACCAacc GUGGUUAU m6b Disrupted HPCB1_40322_G51553.1_90994965
Mutation Mutation ID Sample Name Cancer Type
chr8:g.89981491A>G COSM4422495 C0017T [kidney][NS][other][neoplasm]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
No TargetScan sites are altered. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.


Mutation Mutation ID Sample Name Cancer Type
chr8:g.89981386GA>A COSM391695 LUAD-F00257 [lung][NS][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-3682-5p gtgtttgGAAGTAaat CUACUUCU m6b Disrupted HHFCT_151089_uc003yei.1_23_8
hsa-miR-607 gtgTTTGAAgtaaat GUUCAAAU m6b Created HHFCT_151089_uc003yei.1_23_8

Mutation Mutation ID Sample Name Cancer Type
chr8:g.89980889G>A COSM1314256 TCGA-DK-A2HX-01 [urinary_tract][bladder][carcinoma][NS]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-1-5p cagaataAAGTATGa ACAUACUU m7b Created HHFCT_151088_uc003yei.1_22_8
hsa-miR-26a-1-3p cAGAATAGagtatga CCUAUUCU m7b Disrupted HHFCT_151088_uc003yei.1_22_8
hsa-miR-26a-2-3p cAGAATAGagtatga CCUAUUCU m7b Disrupted HHFCT_151088_uc003yei.1_22_8
hsa-miR-5684 cagaaTAGAGTatga AACUCUAG m6b Disrupted HHFCT_151088_uc003yei.1_22_8

Mutation Mutation ID Sample Name Cancer Type
chr8:g.89980852AGA>GAA COSM4519207 CSCC-49-T [skin][head_neck][carcinoma][squamous_cell_carcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-181a-5p cttgttTGAATGTctct AACAUUCA m7b Created HHFCT_151088_uc003yei.1_22_8
hsa-miR-181b-5p cttgttTGAATGTctct AACAUUCA m7b Created HHFCT_151088_uc003yei.1_22_8
hsa-miR-181c-5p cttgttTGAATGTctct AACAUUCA m7b Created HHFCT_151088_uc003yei.1_22_8
hsa-miR-181d-5p cttgttTGAATGTctct AACAUUCA m7b Created HHFCT_151088_uc003yei.1_22_8
hsa-miR-4262 cttgttTGAATGTCtct GACAUUCA m8a Created HHFCT_151088_uc003yei.1_22_8
hsa-miR-6715b-3p cttGTTTGAatgtctct CUCAAACC m6b Created HHFCT_151088_uc003yei.1_22_8

Mutation Mutation ID Sample Name Cancer Type
chr8:g.89980848C>G COSM346065 LUAD-S01315 [lung][NS][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-642a-3p tagATGTGTCTggga AGACACAU m8a Created HHFCT_151088_uc003yei.1_22_8
hsa-miR-642b-3p tagATGTGTCTggga AGACACAU m8a Created HHFCT_151088_uc003yei.1_22_8

Mutation Mutation ID Sample Name Cancer Type
chr8:g.89980822C>A COSM4758732 pfg122T [stomach][NS][carcinoma][intestinal_adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-1277-5p aatcaagATATATTg AAAUAUAU m7b Created HHRBL_14236_BCBL1-2of3-SCL_2323
hsa-miR-4453 aatCAAGCTatattg GAGCUUGG m6b Disrupted HHRBL_14236_BCBL1-2of3-SCL_2323
hsa-miR-4538 aatCAAGCTatattg GAGCUUGG m6b Disrupted HHRBL_14236_BCBL1-2of3-SCL_2323
hsa-miR-7705 aatcaAGCTATattg AAUAGCUC m6b Disrupted HHRBL_14236_BCBL1-2of3-SCL_2323

Mutation Mutation ID Sample Name Cancer Type
chr8:g.89980821T>C COSM1458553 TCGA-G4-6293-01 [large_intestine][colon][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-135a-5p atcAAGCCATAttgc UAUGGCUU m8a Created HHRBL_14236_BCBL1-2of3-SCL_2323
hsa-miR-135b-5p atcAAGCCATAttgc UAUGGCUU m8a Created HHRBL_14236_BCBL1-2of3-SCL_2323
hsa-miR-4538 atCAAGCTatattgc GAGCUUGG m6b Disrupted HHRBL_14236_BCBL1-2of3-SCL_2323
hsa-miR-5583-3p atcaagCCATATTgc GAAUAUGG m7b Created HHRBL_14236_BCBL1-2of3-SCL_2323
hsa-miR-7705 atcaAGCTATattgc AAUAGCUC m6b Disrupted HHRBL_14236_BCBL1-2of3-SCL_2323
hsa-miR-889-5p atcaAGCCATattgc AAUGGCUG m6b Created HHRBL_14236_BCBL1-2of3-SCL_2323

Mutation Mutation ID Sample Name Cancer Type
chr8:g.89980810T>C COSM4705686 T3225 [large_intestine][colon][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-3691-3p ttgcaACTTGGagga ACCAAGUC m6b Disrupted HHRBL_14236_BCBL1-2of3-SCL_2323
hsa-miR-495-5p ttGCAACTTggagga GAAGUUGC m7b (m7b->m6b) HHRBL_14236_BCBL1-2of3-SCL_2323
hsa-miR-519d-5p ttgcaacTTGGAGGa CCUCCAAA m7a Disrupted HHRBL_14236_BCBL1-2of3-SCL_2323
hsa-miR-5695 ttgcaaCTTGGAGga ACUCCAAG m7b Disrupted HHRBL_14236_BCBL1-2of3-SCL_2323

Mutation Mutation ID Sample Name Cancer Type
chr8:g.89980789A>G COSM1258763 ESO-0009 [oesophagus][NS][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-452-5p gtAAACAGTTggaca AACUGUUU m8a Created HHRBL_14236_BCBL1-2of3-SCL_2323
hsa-miR-4676-3p gtAAACAGTtggaca CACUGUUU m7b (m6b->m7b) HHRBL_14236_BCBL1-2of3-SCL_2323
hsa-miR-892c-3p gtAAACAGTtggaca CACUGUUU m7b (m6b->m7b) HHRBL_14236_BCBL1-2of3-SCL_2323

Mutation Mutation ID Sample Name Cancer Type
chr8:g.89980755A>G COSM1624269 HCC118T [liver][NS][carcinoma][NS]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-6730-3p tcatgGTGTCAGtga CCUGACAC m7b Created HHRBL_14236_BCBL1-2of3-SCL_2323
hsa-miR-888-3p tcatggTGTCAGTga GACUGACA m7b Created HHRBL_14236_BCBL1-2of3-SCL_2323

Mutation Mutation ID Sample Name Cancer Type
chr8:g.89935439A>G COSN1369560 BN28T [liver][NS][carcinoma][NS]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-148a-5p atgcacAGAACTTTg AAAGUUCU m8a Created HHFCT_151076_uc003yei.1_10_18
hsa-miR-148b-5p atgcaCAGAACTTtg AAGUUCUG m8a Created HHFCT_151076_uc003yei.1_10_18
hsa-miR-2113 atGCACAAAactttg AUUUGUGC m7b (m7b->m6b) HHFCT_151076_uc003yei.1_10_18
hsa-miR-5008-3p atGCACAGaactttg CCUGUGCU m6b Created HHFCT_151076_uc003yei.1_10_18
hsa-miR-561-3p atgcacaAAACTTTg CAAAGUUU m7b Disrupted HHFCT_151076_uc003yei.1_10_18
hsa-miR-6737-3p atGCACAGAactttg UCUGUGCU m7a (m6a->m7a) HHFCT_151076_uc003yei.1_10_18
hsa-miR-6874-3p atgcaCAGAACTttg CAGUUCUG m7b Created HHFCT_151076_uc003yei.1_10_18
hsa-miR-6889-3p atGCACAGAactttg UCUGUGCC m7a (m6a->m7a) HHFCT_151076_uc003yei.1_10_18
hsa-miR-7157-3p atGCACAGAactttg UCUGUGCU m7a (m6a->m7a) HHFCT_151076_uc003yei.1_10_18
hsa-miR-148a-5p atgcacAGAACTTTg AAAGUUCU m8a Created HHKTA_9370_NM_002485|2492|2531|7.00940645038465|0.527625152492849
hsa-miR-148b-5p atgcaCAGAACTTtg AAGUUCUG m8a Created HHKTA_9370_NM_002485|2492|2531|7.00940645038465|0.527625152492849
hsa-miR-2113 atGCACAAAactttg AUUUGUGC m7b (m7b->m6b) HHKTA_9370_NM_002485|2492|2531|7.00940645038465|0.527625152492849
hsa-miR-5008-3p atGCACAGaactttg CCUGUGCU m6b Created HHKTA_9370_NM_002485|2492|2531|7.00940645038465|0.527625152492849
hsa-miR-561-3p atgcacaAAACTTTg CAAAGUUU m7b Disrupted HHKTA_9370_NM_002485|2492|2531|7.00940645038465|0.527625152492849
hsa-miR-6737-3p atGCACAGAactttg UCUGUGCU m7a (m6a->m7a) HHKTA_9370_NM_002485|2492|2531|7.00940645038465|0.527625152492849
hsa-miR-6874-3p atgcaCAGAACTttg CAGUUCUG m7b Created HHKTA_9370_NM_002485|2492|2531|7.00940645038465|0.527625152492849
hsa-miR-6889-3p atGCACAGAactttg UCUGUGCC m7a (m6a->m7a) HHKTA_9370_NM_002485|2492|2531|7.00940645038465|0.527625152492849
hsa-miR-7157-3p atGCACAGAactttg UCUGUGCU m7a (m6a->m7a) HHKTA_9370_NM_002485|2492|2531|7.00940645038465|0.527625152492849
hsa-miR-148a-5p atgcacAGAACTTTg AAAGUUCU m8a Created HPCB1_40315_G51546.1_90947671
hsa-miR-148b-5p atgcaCAGAACTTtg AAGUUCUG m8a Created HPCB1_40315_G51546.1_90947671
hsa-miR-2113 atGCACAAAactttg AUUUGUGC m7b (m7b->m6b) HPCB1_40315_G51546.1_90947671
hsa-miR-5008-3p atGCACAGaactttg CCUGUGCU m6b Created HPCB1_40315_G51546.1_90947671
hsa-miR-561-3p atgcacaAAACTTTg CAAAGUUU m7b Disrupted HPCB1_40315_G51546.1_90947671
hsa-miR-6737-3p atGCACAGAactttg UCUGUGCU m7a (m6a->m7a) HPCB1_40315_G51546.1_90947671
hsa-miR-6874-3p atgcaCAGAACTttg CAGUUCUG m7b Created HPCB1_40315_G51546.1_90947671
hsa-miR-6889-3p atGCACAGAactttg UCUGUGCC m7a (m6a->m7a) HPCB1_40315_G51546.1_90947671
hsa-miR-7157-3p atGCACAGAactttg UCUGUGCU m7a (m6a->m7a) HPCB1_40315_G51546.1_90947671
hsa-miR-148a-5p atgcacAGAACTTTg AAAGUUCU m8a Created HPKTA_60322_G65243.1_90947677
hsa-miR-148b-5p atgcaCAGAACTTtg AAGUUCUG m8a Created HPKTA_60322_G65243.1_90947677
hsa-miR-2113 atGCACAAAactttg AUUUGUGC m7b (m7b->m6b) HPKTA_60322_G65243.1_90947677
hsa-miR-5008-3p atGCACAGaactttg CCUGUGCU m6b Created HPKTA_60322_G65243.1_90947677
hsa-miR-561-3p atgcacaAAACTTTg CAAAGUUU m7b Disrupted HPKTA_60322_G65243.1_90947677
hsa-miR-6737-3p atGCACAGAactttg UCUGUGCU m7a (m6a->m7a) HPKTA_60322_G65243.1_90947677
hsa-miR-6874-3p atgcaCAGAACTttg CAGUUCUG m7b Created HPKTA_60322_G65243.1_90947677
hsa-miR-6889-3p atGCACAGAactttg UCUGUGCC m7a (m6a->m7a) HPKTA_60322_G65243.1_90947677
hsa-miR-7157-3p atGCACAGAactttg UCUGUGCU m7a (m6a->m7a) HPKTA_60322_G65243.1_90947677
hsa-miR-148a-5p atgcacAGAACTTTg AAAGUUCU m8a Created HPRO6_75359_G90243.1_90947671
hsa-miR-148b-5p atgcaCAGAACTTtg AAGUUCUG m8a Created HPRO6_75359_G90243.1_90947671
hsa-miR-2113 atGCACAAAactttg AUUUGUGC m7b (m7b->m6b) HPRO6_75359_G90243.1_90947671
hsa-miR-5008-3p atGCACAGaactttg CCUGUGCU m6b Created HPRO6_75359_G90243.1_90947671
hsa-miR-561-3p atgcacaAAACTTTg CAAAGUUU m7b Disrupted HPRO6_75359_G90243.1_90947671
hsa-miR-6737-3p atGCACAGAactttg UCUGUGCU m7a (m6a->m7a) HPRO6_75359_G90243.1_90947671
hsa-miR-6874-3p atgcaCAGAACTttg CAGUUCUG m7b Created HPRO6_75359_G90243.1_90947671
hsa-miR-6889-3p atGCACAGAactttg UCUGUGCC m7a (m6a->m7a) HPRO6_75359_G90243.1_90947671
hsa-miR-7157-3p atGCACAGAactttg UCUGUGCU m7a (m6a->m7a) HPRO6_75359_G90243.1_90947671

*By default, only target sites identified by TargetScan are displayed. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.

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