SomamiR DB 2.0
Somatic mutations altering microRNA-ceRNA interactions
  Home Search Help Download  

PolymiRTS Database

Prediction criteria: TargetScan sites only     All 6mer or longer seed matches

Transcript ID: hsa_circ_0028331
Gene Symbol: NAA25
Browse Associations

Somatic mutations that impact miRNA target sites



Mutation Mutation ID Sample Name Cancer Type
chr12:g.112054540G>C COSM3811043 TCGA-BH-A0B6-01 [breast][NS][carcinoma][NS]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-1226-5p agGCCCTCACtttgc GUGAGGGC m8a Created HHFCT_34629_cluster-5774_16_17
hsa-miR-3127-5p agGCCCTGActttgc AUCAGGGC m7b (m7b->m6b) HHFCT_34629_cluster-5774_16_17
hsa-miR-3609 aggcccTCACTTTGc CAAAGUGA m8a Created HHFCT_34629_cluster-5774_16_17
hsa-miR-3616-3p agGCCCTCactttgc CGAGGGCA m6b Created HHFCT_34629_cluster-5774_16_17
hsa-miR-3918 aGGCCCTGactttgc ACAGGGCC m7b Disrupted HHFCT_34629_cluster-5774_16_17
hsa-miR-4512 AGGCCCTGactttgc CAGGGCCU m8a Disrupted HHFCT_34629_cluster-5774_16_17
hsa-miR-520g-3p aggccctCACTTTGc ACAAAGUG m7b Created HHFCT_34629_cluster-5774_16_17
hsa-miR-520h aggccctCACTTTGc ACAAAGUG m7b Created HHFCT_34629_cluster-5774_16_17
hsa-miR-548ah-5p aggcccTCACTTTgc AAAAGUGA m7b Created HHFCT_34629_cluster-5774_16_17
hsa-miR-6895-5p aGGCCCTGactttgc CAGGGCCA m7a Disrupted HHFCT_34629_cluster-5774_16_17
hsa-miR-7160-3p aGGCCCTGactttgc CAGGGCCC m7a Disrupted HHFCT_34629_cluster-5774_16_17

Mutation Mutation ID Sample Name Cancer Type
chr12:g.112054530G>A COSM3811042 TCGA-BH-A0B6-01 [breast][NS][carcinoma][NS]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-1236-3p tttgctGGAAGAGGg CCUCUUCC m8a Disrupted HHFCT_34629_cluster-5774_16_17
hsa-miR-130b-5p tttgctGAAAGAGgg ACUCUUUC m7b Created HHFCT_34629_cluster-5774_16_17
hsa-miR-30a-3p tttgCTGAAAGaggg CUUUCAGU m7a Created HHFCT_34629_cluster-5774_16_17
hsa-miR-30d-3p tttgCTGAAAGaggg CUUUCAGU m7a Created HHFCT_34629_cluster-5774_16_17
hsa-miR-30e-3p tttgCTGAAAGaggg CUUUCAGU m7a Created HHFCT_34629_cluster-5774_16_17
hsa-miR-3180-5p tttgCTGGAAGaggg CUUCCAGA m7a Disrupted HHFCT_34629_cluster-5774_16_17
hsa-miR-338-3p ttTGCTGGAagaggg UCCAGCAU m7a (m7a->m6a) HHFCT_34629_cluster-5774_16_17
hsa-miR-4291 ttTGCTGAAagaggg UUCAGCAG m7a (m6a->m7a) HHFCT_34629_cluster-5774_16_17
hsa-miR-4530 ttTGCTGGaagaggg CCCAGCAG m6b Disrupted HHFCT_34629_cluster-5774_16_17
hsa-miR-877-3p tttgctgGAAGAGGg UCCUCUUC m7b Disrupted HHFCT_34629_cluster-5774_16_17

Mutation Mutation ID Sample Name Cancer Type
chr12:g.112054517C>T COSM1706288 YUZINO [skin][mucosal][malignant_melanoma][NS]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-1246 ggattAATCCATagc AAUGGAUU m7b Created HHFCT_34628_cluster-5774_15_25
hsa-miR-3115 ggattaACCCATAgc AUAUGGGU m7b Disrupted HHFCT_34628_cluster-5774_15_25
hsa-miR-1246 ggattAATCCATagc AAUGGAUU m7b Created HPKTA_16063_G17314.1_112492326
hsa-miR-3115 ggattaACCCATAgc AUAUGGGU m7b Disrupted HPKTA_16063_G17314.1_112492326

Mutation Mutation ID Sample Name Cancer Type
chr12:g.112054509C>T COSM935143 TCGA-B5-A11E-01 [endometrium][NS][carcinoma][endometrioid_carcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-3202 ccatagCCCTTCCAa UGGAAGGG m8a Disrupted HHFCT_34628_cluster-5774_15_25
hsa-miR-4533 ccatagcCCTTCCAa UGGAAGGA m7a Disrupted HHFCT_34628_cluster-5774_15_25
hsa-miR-6077 ccatagCTCTTCCaa GGGAAGAG m7b Created HHFCT_34628_cluster-5774_15_25
hsa-miR-7-5p ccatagcTCTTCCAa UGGAAGAC m7a Created HHFCT_34628_cluster-5774_15_25

Mutation Mutation ID Sample Name Cancer Type
chr12:g.112054476C>T COSM126820 TCGA-AX-A0J0-01 [endometrium][NS][carcinoma][endometrioid_carcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-6715b-3p gcttGTTTGAatcta CUCAAACC m6b Created HHFCT_34628_cluster-5774_15_25
hsa-miR-6715b-3p gcttGTTTGAatcta CUCAAACC m6b Created HHFKP_33438_cluster-5774_22_16
Mutation Mutation ID Sample Name Cancer Type
chr12:g.112054476C>A COSM3811041 TCGA-AC-A3W6-01 [breast][NS][carcinoma][NS]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
No TargetScan sites are altered. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.


Mutation Mutation ID Sample Name Cancer Type
chr12:g.112054458G>T COSM4633527 HCT8 [large_intestine][NS][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-338-3p tATGCTGGgtgcatt UCCAGCAU m7b Disrupted HHFCT_34627_cluster-5774_14_34
hsa-miR-500b-3p tatgCTGGGTGCatt GCACCCAG m8a Disrupted HHFCT_34627_cluster-5774_14_34
hsa-miR-501-3p tatgctgGGTGCATt AAUGCACC m7b Disrupted HHFCT_34627_cluster-5774_14_34
hsa-miR-502-3p tatgctgGGTGCATt AAUGCACC m7b Disrupted HHFCT_34627_cluster-5774_14_34
hsa-miR-8064 tatgctGTGTGCatt AGCACACU m6b Created HHFCT_34627_cluster-5774_14_34

Mutation Mutation ID Sample Name Cancer Type
chr12:g.112054419G>A COSM1948122 RKO [large_intestine][NS][other][neoplasm]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-1179 cagcctcAATGCTaa AAGCAUUC m6b Created HHFCT_34627_cluster-5774_14_34
hsa-miR-1304-5p caGCCTCAAtgctaa UUUGAGGC m7b (m6b->m7b) HHFCT_34627_cluster-5774_14_34
hsa-miR-2467-5p cAGCCTCAatgctaa UGAGGCUC m7a Created HHFCT_34627_cluster-5774_14_34
hsa-miR-3975 cAGCCTCAatgctaa UGAGGCUA m7a Created HHFCT_34627_cluster-5774_14_34
hsa-miR-6765-5p caGCCTCAatgctaa GUGAGGCG m6b Created HHFCT_34627_cluster-5774_14_34

Mutation Mutation ID Sample Name Cancer Type
chr12:g.112054405C>T COSM3456147 TCGA-FS-A1YY-06 [skin][NS][malignant_melanoma][NS]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-1287-5p agcatATCCAGCAtg UGCUGGAU m8a Disrupted HHFCT_34627_cluster-5774_14_34
hsa-miR-3135b agcataTCCAGCatg GGCUGGAG m6b Disrupted HHFCT_34627_cluster-5774_14_34
hsa-miR-3201 agCATATCCagcatg GGGAUAUG m7b (m7b->m6b) HHFCT_34627_cluster-5774_14_34
hsa-miR-4427 agcaTATTCAGcatg UCUGAAUA m7b Created HHFCT_34627_cluster-5774_14_34
hsa-miR-4728-3p agcatatTCAGCATg CAUGCUGA m7b Created HHFCT_34627_cluster-5774_14_34
hsa-miR-4791 agCATATCCAgcatg UGGAUAUG m8a Disrupted HHFCT_34627_cluster-5774_14_34
hsa-miR-5583-3p agCATATTCagcatg GAAUAUGG m7a (m6a->m7a) HHFCT_34627_cluster-5774_14_34

Mutation Mutation ID Sample Name Cancer Type
chr12:g.112054404C>A COSM3456146 TCGA-D3-A51T-06 [skin][NS][malignant_melanoma][NS]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-1273e gcataTCAAGCAtga UUGCUUGA m7b Created HHFCT_34627_cluster-5774_14_34
hsa-miR-1287-5p gcatATCCAGCAtga UGCUGGAU m8a Disrupted HHFCT_34627_cluster-5774_14_34
hsa-miR-3135b gcataTCCAGCatga GGCUGGAG m6b Disrupted HHFCT_34627_cluster-5774_14_34
hsa-miR-4728-3p gcatatcCAGCATGa CAUGCUGA m7a Disrupted HHFCT_34627_cluster-5774_14_34
hsa-miR-4791 gCATATCCAgcatga UGGAUAUG m8a (m8a->m7a) HHFCT_34627_cluster-5774_14_34

*By default, only target sites identified by TargetScan are displayed. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.

Genome Browser