SomamiR DB 2.0
Somatic mutations altering microRNA-ceRNA interactions
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PolymiRTS Database

Prediction criteria: TargetScan sites only     All 6mer or longer seed matches

Transcript ID: NM_001204293
Gene Symbol: MUC1
Browse Associations

Somatic mutations that impact miRNA target sites



Mutation Mutation ID Sample Name Cancer Type
chr1:g.155188210C>T COSM108532 22T [upper_aerodigestive_tract][mouth][carcinoma][squamous_cell_carcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-204-3p ggaagaTCCCAGCac GCUGGGAA m7a Disrupted HHFCT_5216_cluster-1870_3_636
hsa-miR-3135b ggaagatTCCAGCac GGCUGGAG m6b Created HHFCT_5216_cluster-1870_3_636
hsa-miR-450b-3p ggaaGATCCCAgcac UUGGGAUC m7b Disrupted HHFCT_5216_cluster-1870_3_636
hsa-miR-5589-5p ggaagatCCCAGCac GGCUGGGU m6b Disrupted HHFCT_5216_cluster-1870_3_636
hsa-miR-6128 ggaagATTCCAGcac ACUGGAAU m7b Created HHFCT_5216_cluster-1870_3_636
hsa-miR-619-5p ggaagATCCCAGCac GCUGGGAU m8a Disrupted HHFCT_5216_cluster-1870_3_636
hsa-miR-638 ggaaGATCCCagcac AGGGAUCG m6b Disrupted HHFCT_5216_cluster-1870_3_636
hsa-miR-6506-5p ggaagATCCCAGcac ACUGGGAU m7b Disrupted HHFCT_5216_cluster-1870_3_636
hsa-miR-769-3p ggaaGATCCCAGcac CUGGGAUC m8a Disrupted HHFCT_5216_cluster-1870_3_636

Mutation Mutation ID Sample Name Cancer Type
chr1:g.155188192TACC>C COSM1600911 HCC109T [liver][NS][carcinoma][NS]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-1244 cgACTACTaccaagagct AAGUAGUU m6b Disrupted HHFCT_5216_cluster-1870_3_636

Mutation Mutation ID Sample Name Cancer Type
chr1:g.155187525G>A COSM4622143 DLD1 [large_intestine][NS][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-221-5p gTGCCAGGctggggc ACCUGGCA m7b Disrupted HHFKP_4770_cluster-1870_2_221
hsa-miR-622 gtgcCAGACTGgggc ACAGUCUG m7b Created HHFKP_4770_cluster-1870_2_221
hsa-miR-6849-3p gtgccAGGCTGGggc ACCAGCCU m7b Disrupted HHFKP_4770_cluster-1870_2_221
hsa-miR-221-5p gTGCCAGGctggggc ACCUGGCA m7b Disrupted HHFKP_4770_cluster-1870_2_221
hsa-miR-622 gtgcCAGACTGgggc ACAGUCUG m7b Created HHFKP_4770_cluster-1870_2_221
hsa-miR-6849-3p gtgccAGGCTGGggc ACCAGCCU m7b Disrupted HHFKP_4770_cluster-1870_2_221

Mutation Mutation ID Sample Name Cancer Type
chr1:g.155187269C>T COSM1668025 SW620 [large_intestine][NS][other][neoplasm]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-4641 cCATGGGCgctatgt UGCCCAUG m7b Disrupted HHFKP_4769_cluster-1870_1_43
hsa-miR-5682 ccatgGGTGCTAtgt GUAGCACC m7b Created HHFKP_4769_cluster-1870_1_43
hsa-miR-6871-3p ccatGGGTGCTatgt CAGCACCC m7b Created HHFKP_4769_cluster-1870_1_43
hsa-miR-4641 cCATGGGCgctatgt UGCCCAUG m7b Disrupted HHFKP_4769_cluster-1870_1_43
hsa-miR-5682 ccatgGGTGCTAtgt GUAGCACC m7b Created HHFKP_4769_cluster-1870_1_43
hsa-miR-6871-3p ccatGGGTGCTatgt CAGCACCC m7b Created HHFKP_4769_cluster-1870_1_43

Mutation Mutation ID Sample Name Cancer Type
chr1:g.155187245G>A COSM1688709 YUZINO [skin][mucosal][malignant_melanoma][NS]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-1263 caGTACCAatcgtag AUGGUACC m6b Created HHFCT_5215_cluster-1870_2_135
hsa-miR-150-3p caGTACCAatcgtag CUGGUACA m6b Created HHFCT_5215_cluster-1870_2_135
hsa-miR-509-3p cagtACCAATCgtag UGAUUGGU m7b Created HHFCT_5215_cluster-1870_2_135
hsa-miR-1263 caGTACCAatcgtag AUGGUACC m6b Created HHFCT_5215_cluster-1870_2_135
hsa-miR-150-3p caGTACCAatcgtag CUGGUACA m6b Created HHFCT_5215_cluster-1870_2_135
hsa-miR-509-3p cagtACCAATCgtag UGAUUGGU m7b Created HHFCT_5215_cluster-1870_2_135
Mutation Mutation ID Sample Name Cancer Type
chr1:g.155187241G>A COSM32813 TCGA-AY-6386-01 [large_intestine][caecum][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
No TargetScan sites are altered. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.


Mutation Mutation ID Sample Name Cancer Type
chr1:g.155186013C>A COSN8636295 2734_T [lung][NS][carcinoma][squamous_cell_carcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-15a-5p gGCTGCTAacagcct UAGCAGCA m7a Created HHFCT_5214_cluster-1870_1_60
hsa-miR-15b-5p gGCTGCTAacagcct UAGCAGCA m7a Created HHFCT_5214_cluster-1870_1_60
hsa-miR-16-5p gGCTGCTAacagcct UAGCAGCA m7a Created HHFCT_5214_cluster-1870_1_60
hsa-miR-195-5p gGCTGCTAacagcct UAGCAGCA m7a Created HHFCT_5214_cluster-1870_1_60
hsa-miR-374b-3p ggCTGCTAAcagcct CUUAGCAG m7b (m6b->m7b) HHFCT_5214_cluster-1870_1_60
hsa-miR-4468 ggCTGCTCacagcct AGAGCAGA m6b Disrupted HHFCT_5214_cluster-1870_1_60
hsa-miR-4677-3p ggctgCTCACAGcct UCUGUGAG m7b Disrupted HHFCT_5214_cluster-1870_1_60
hsa-miR-4687-3p ggctgctAACAGCCt UGGCUGUU m7b Created HHFCT_5214_cluster-1870_1_60
hsa-miR-503-5p gGCTGCTAacagcct UAGCAGCG m7a Created HHFCT_5214_cluster-1870_1_60
hsa-miR-7974 ggctgctCACAGCCt AGGCUGUG m7b Disrupted HHFCT_5214_cluster-1870_1_60

*By default, only target sites identified by TargetScan are displayed. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.

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