SomamiR DB 2.0
Somatic mutations altering microRNA-ceRNA interactions
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PolymiRTS Database
Prediction criteria: TargetScan sites only     All 6mer or longer seed matches
Transcript ID: hsa_circ_0017159
Gene Symbol: MTR
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Browse Pathways

Somatic mutations that impact miRNA target sites


Mutation Mutation ID Sample Name Cancer Type
chr1:g.236873809G>T COSM906101 TCGA-D1-A16X-01 [endometrium][NS][carcinoma][endometrioid_carcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-200a-5p gtgaTAAGATactga CAUCUUAC m6b Disrupted HHFCT_15984_cluster-1135_20_8
hsa-miR-200b-5p gtgaTAAGATactga CAUCUUAC m6b Disrupted HHFCT_15984_cluster-1135_20_8
hsa-miR-4795-3p gtgATAATATactga AUAUUAUU m7a Created HHFCT_15984_cluster-1135_20_8
hsa-miR-656-3p gtgATAATATactga AAUAUUAU m7b Created HHFCT_15984_cluster-1135_20_8
Mutation Mutation ID Sample Name Cancer Type
chr1:g.236863474C>T COSM4029872 TCGA-BR-8296-01 [stomach][NS][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
No TargetScan sites are altered. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.


Mutation Mutation ID Sample Name Cancer Type
chr1:g.236862290A>T COSM4916945 TCGA-ED-A7PZ-01 [liver][NS][carcinoma][hepatocellular_carcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-5581-3p ccctttCATGGAAaa UUCCAUGC m7a Disrupted HHHNA_2784_MTR|NM_000254|exon_CDS|-7.76367456170355|-0.357835051849976
hsa-miR-5681a CCCTTTCTtggaaaa AGAAAGGG m8a Created HHHNA_2784_MTR|NM_000254|exon_CDS|-7.76367456170355|-0.357835051849976
hsa-miR-587 ccctttcATGGAAAa UUUCCAUA m7a Disrupted HHHNA_2784_MTR|NM_000254|exon_CDS|-7.76367456170355|-0.357835051849976
hsa-miR-8060 ccctTTCATGGaaaa CCAUGAAG m7a Disrupted HHHNA_2784_MTR|NM_000254|exon_CDS|-7.76367456170355|-0.357835051849976
hsa-miR-5581-3p ccctttCATGGAAaa UUCCAUGC m7a Disrupted HHHSA_2784_MTR|NM_000254|exon_CDS|-7.76367456170355|-0.357835051849976
hsa-miR-5681a CCCTTTCTtggaaaa AGAAAGGG m8a Created HHHSA_2784_MTR|NM_000254|exon_CDS|-7.76367456170355|-0.357835051849976
hsa-miR-587 ccctttcATGGAAAa UUUCCAUA m7a Disrupted HHHSA_2784_MTR|NM_000254|exon_CDS|-7.76367456170355|-0.357835051849976
hsa-miR-8060 ccctTTCATGGaaaa CCAUGAAG m7a Disrupted HHHSA_2784_MTR|NM_000254|exon_CDS|-7.76367456170355|-0.357835051849976
Mutation Mutation ID Sample Name Cancer Type
chr1:g.236861242G>T COSM906099 TCGA-BS-A0UF-01 [endometrium][NS][carcinoma][endometrioid_carcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
No TargetScan sites are altered. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.


Mutation Mutation ID Sample Name Cancer Type
chr1:g.236861237T>C COSM4029871 TCGA-BR-7707-01 [stomach][NS][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-1226-3p aaaattGCTGGTGAt UCACCAGC m8a Created HHHNA_2782_MTR|NM_000254|exon_CDS|-7.70827020927109|0.426263860747219
hsa-miR-4733-3p aaaattgCTGGTGat CCACCAGG m6b Created HHHNA_2782_MTR|NM_000254|exon_CDS|-7.70827020927109|0.426263860747219
hsa-miR-634 aaaatTGCTGGTgat AACCAGCA m7b Created HHHNA_2782_MTR|NM_000254|exon_CDS|-7.70827020927109|0.426263860747219
hsa-miR-1226-3p aaaattGCTGGTGAt UCACCAGC m8a Created HHHNE_11672_MTR|NM_000254|exon_CDS|-7.78348629198448|-0.79772804294134
hsa-miR-4733-3p aaaattgCTGGTGat CCACCAGG m6b Created HHHNE_11672_MTR|NM_000254|exon_CDS|-7.78348629198448|-0.79772804294134
hsa-miR-634 aaaatTGCTGGTgat AACCAGCA m7b Created HHHNE_11672_MTR|NM_000254|exon_CDS|-7.78348629198448|-0.79772804294134
hsa-miR-1226-3p aaaattGCTGGTGAt UCACCAGC m8a Created HHHSA_2782_MTR|NM_000254|exon_CDS|-7.70827020927109|0.426263860747219
hsa-miR-4733-3p aaaattgCTGGTGat CCACCAGG m6b Created HHHSA_2782_MTR|NM_000254|exon_CDS|-7.70827020927109|0.426263860747219
hsa-miR-634 aaaatTGCTGGTgat AACCAGCA m7b Created HHHSA_2782_MTR|NM_000254|exon_CDS|-7.70827020927109|0.426263860747219
hsa-miR-1226-3p aaaattGCTGGTGAt UCACCAGC m8a Created HHHSE_11672_MTR|NM_000254|exon_CDS|-7.78348629198448|-0.79772804294134
hsa-miR-4733-3p aaaattgCTGGTGat CCACCAGG m6b Created HHHSE_11672_MTR|NM_000254|exon_CDS|-7.78348629198448|-0.79772804294134
hsa-miR-634 aaaatTGCTGGTgat AACCAGCA m7b Created HHHSE_11672_MTR|NM_000254|exon_CDS|-7.78348629198448|-0.79772804294134

Mutation Mutation ID Sample Name Cancer Type
chr1:g.236860864C>G COSN7209460 8057726 [pancreas][NS][carcinoma][NS]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-4666a-3p tTTGTATGaataaag CAUACAAU m7a Created HHFCT_15982_cluster-1135_18_8
hsa-miR-485-3p ttTGTATGAataaag GUCAUACA m7b (m6b->m7b) HHFCT_15982_cluster-1135_18_8
hsa-miR-539-3p ttTGTATGAataaag AUCAUACA m7b (m6b->m7b) HHFCT_15982_cluster-1135_18_8
hsa-miR-664a-3p tttgtATGAATAaag UAUUCAUU m7a Created HHFCT_15982_cluster-1135_18_8

Mutation Mutation ID Sample Name Cancer Type
chr1:g.236853033A>G COSM404485 LUAD-S01404 [lung][NS][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-7161-3p tgtgAAGATCTcatc UAGAUCUU m7b Disrupted HHFKP_15462_cluster-1135_10_295
hsa-miR-769-5p tgtgaAGGTCTCAtc UGAGACCU m8a Created HHFKP_15462_cluster-1135_10_295

Mutation Mutation ID Sample Name Cancer Type
chr1:g.236853012A>C COSM4421739 2217539 [pleura][NS][pulmonary_blastoma][NS]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-33b-3p cataAGGCACTtctg CAGUGCCU m7b Created HHFKP_15462_cluster-1135_10_295
hsa-miR-515-3p cataAGGCACTtctg GAGUGCCU m7b Created HHFKP_15462_cluster-1135_10_295
hsa-miR-519e-3p cataAGGCACTTctg AAGUGCCU m8a Created HHFKP_15462_cluster-1135_10_295

Mutation Mutation ID Sample Name Cancer Type
chr1:g.236853005C>T COSM3485666 TCGA-EE-A29V-06 [skin][NS][malignant_melanoma][NS]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-1246 tgatATCCATaagga AAUGGAUU m6b Disrupted HHFKP_15462_cluster-1135_10_295
hsa-miR-1261 tgaTATCCATaagga AUGGAUAA m7a Disrupted HHFKP_15462_cluster-1135_10_295
hsa-miR-144-5p TGATATCCataagga GGAUAUCA m8a Disrupted HHFKP_15462_cluster-1135_10_295

Mutation Mutation ID Sample Name Cancer Type
chr1:g.236853001T>C COSM4029870 TCGA-CG-5721-01 [stomach][NS][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-1261 atgatgaTATCCATa AUGGAUAA m7a Disrupted HHFKP_15462_cluster-1135_10_295
hsa-miR-136-3p atGATGATatccata CAUCAUCG m6b Disrupted HHFKP_15462_cluster-1135_10_295
hsa-miR-144-5p atgaTGATATCCata GGAUAUCA m8a Disrupted HHFKP_15462_cluster-1135_10_295
hsa-miR-3201 atgatgATATCCata GGGAUAUG m6b Disrupted HHFKP_15462_cluster-1135_10_295

Mutation Mutation ID Sample Name Cancer Type
chr1:g.236852989T>A COSM4136036 C0072T [kidney][NS][other][neoplasm]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-1273h-5p aCCTCCCAGtgtatg CUGGGAGG m8a (m7a->m8a) HHFKP_15462_cluster-1135_10_295
hsa-miR-1321 aCCTCCCTGtgtatg CAGGGAGG m8a (m8a->m7a) HHFKP_15462_cluster-1135_10_295
hsa-miR-30b-3p aCCTCCCAGtgtatg CUGGGAGG m8a (m7a->m8a) HHFKP_15462_cluster-1135_10_295
hsa-miR-3192-5p acCTCCCAGtgtatg UCUGGGAG m7b (m6b->m7b) HHFKP_15462_cluster-1135_10_295
hsa-miR-3689a-3p aCCTCCCAGtgtatg CUGGGAGG m8a (m7a->m8a) HHFKP_15462_cluster-1135_10_295
hsa-miR-3689b-3p aCCTCCCAGtgtatg CUGGGAGG m8a (m7a->m8a) HHFKP_15462_cluster-1135_10_295
hsa-miR-3689c aCCTCCCAGtgtatg CUGGGAGG m8a (m7a->m8a) HHFKP_15462_cluster-1135_10_295
hsa-miR-4270 acCTCCCTGtgtatg UCAGGGAG m7b (m7b->m6b) HHFKP_15462_cluster-1135_10_295
hsa-miR-4441 acCTCCCTGTgtatg ACAGGGAG m8a Disrupted HHFKP_15462_cluster-1135_10_295
hsa-miR-4672 acctccCTGTGTAtg UUACACAG m7b Disrupted HHFKP_15462_cluster-1135_10_295
hsa-miR-4756-5p aCCTCCCTGtgtatg CAGGGAGG m8a (m8a->m7a) HHFKP_15462_cluster-1135_10_295
hsa-miR-6754-5p acCTCCCTGtgtatg CCAGGGAG m7b (m7b->m6b) HHFKP_15462_cluster-1135_10_295
hsa-miR-6757-3p acctcCCAGTGTatg AACACUGG m7b Created HHFKP_15462_cluster-1135_10_295
hsa-miR-6768-5p acctcCCTGTGTatg CACACAGG m7b Disrupted HHFKP_15462_cluster-1135_10_295
hsa-miR-6779-5p aCCTCCCAGtgtatg CUGGGAGG m8a (m7a->m8a) HHFKP_15462_cluster-1135_10_295
hsa-miR-6780a-5p aCCTCCCAgtgtatg UUGGGAGG m7b Created HHFKP_15462_cluster-1135_10_295

Mutation Mutation ID Sample Name Cancer Type
chr1:g.236852984C>T COSM358347 LUAD-CHTN-MAD06-00668 [lung][NS][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-1321 tggaaaCCTCCCTGt CAGGGAGG m8a Disrupted HHFKP_15462_cluster-1135_10_295
hsa-miR-4270 tggaaacCTCCCTGt UCAGGGAG m7b Disrupted HHFKP_15462_cluster-1135_10_295
hsa-miR-4441 tggaaacCTCCCTGt ACAGGGAG m7b Disrupted HHFKP_15462_cluster-1135_10_295
hsa-miR-4739 tggaaaCCTCCCTgt AAGGGAGG m7b Disrupted HHFKP_15462_cluster-1135_10_295
hsa-miR-4756-5p tggaaaCCTCCCTGt CAGGGAGG m8a Disrupted HHFKP_15462_cluster-1135_10_295
hsa-miR-6754-5p tggaaacCTCCCTGt CCAGGGAG m7b Disrupted HHFKP_15462_cluster-1135_10_295
hsa-miR-6799-5p tggaaACCTCCCtgt GGGGAGGU m7b Disrupted HHFKP_15462_cluster-1135_10_295
hsa-miR-9500 tggaaaCTTCCCTgt AAGGGAAG m7b Created HHFKP_15462_cluster-1135_10_295

Mutation Mutation ID Sample Name Cancer Type
chr1:g.236850415T>C COSM906094 TCGA-BS-A0UJ-01 [endometrium][NS][carcinoma][endometrioid_carcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-127-5p tggGCTTCAatccaa CUGAAGCU m6b Created HPSLC_1030_G1234.1_237013723
hsa-miR-4786-3p tgGGCTTCAatccaa UGAAGCCA m7a (m6a->m7a) HPSLC_1030_G1234.1_237013723
hsa-miR-7843-3p tgGGCTTCAatccaa AUGAAGCC m7b (m6b->m7b) HPSLC_1030_G1234.1_237013723
hsa-miR-9-3p tggGCTTTAatccaa AUAAAGCU m6b Disrupted HPSLC_1030_G1234.1_237013723

*By default, only target sites identified by TargetScan are displayed. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.

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