SomamiR DB 2.0
Somatic mutations altering microRNA-ceRNA interactions
  Home Search Help Download  

PolymiRTS Database
Prediction criteria: TargetScan sites only     All 6mer or longer seed matches
Transcript ID: hsa_circ_0017154
Gene Symbol: MTR
Browse Associations
Browse Pathways

Somatic mutations that impact miRNA target sites


Mutation Mutation ID Sample Name Cancer Type
chr1:g.236891215T>G COSM3804467 TCGA-A2-A0T5-01 [breast][NS][carcinoma][NS]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-6776-3p cccggggGGTGGTTg CAACCACC m7b Created HHFCT_15990_cluster-1135_26_8
hsa-miR-6840-5p cCCGGGGGgtggttg ACCCCCGG m7b Created HHFCT_15990_cluster-1135_26_8

Mutation Mutation ID Sample Name Cancer Type
chr1:g.236891210C>T COSM1637710 PD6750a [bone][femur][chondrosarcoma][NS]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-4747-3p cCGGGCCTggggtgt AAGGCCCG m7b Created HHFCT_15990_cluster-1135_26_8
hsa-miR-5587-3p ccgggCCCGGGGtgt GCCCCGGG m7b Disrupted HHFCT_15990_cluster-1135_26_8

Mutation Mutation ID Sample Name Cancer Type
chr1:g.236891205G>A COSM210472 TCGA-AA-3710-01 [large_intestine][colon][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-1254 aaacTCCAGGCccgg AGCCUGGA m7b Created HHFCT_15990_cluster-1135_26_8
hsa-miR-1538 aaactCCGGGCCcgg CGGCCCGG m7b Disrupted HHFCT_15990_cluster-1135_26_8
hsa-miR-2861 aaactcCAGGCCCgg GGGGCCUG m7b Created HHFCT_15990_cluster-1135_26_8
hsa-miR-3116 aaacTCCAGGCccgg UGCCUGGA m7b Created HHFCT_15990_cluster-1135_26_8
hsa-miR-4254 aaaCTCCAGGCccgg GCCUGGAG m8a Created HHFCT_15990_cluster-1135_26_8
hsa-miR-4745-3p aaactCCGGGCCcgg UGGCCCGG m7b Disrupted HHFCT_15990_cluster-1135_26_8
hsa-miR-6749-5p aaactccAGGCCCGg UCGGGCCU m7b Created HHFCT_15990_cluster-1135_26_8

Mutation Mutation ID Sample Name Cancer Type
chr1:g.236888485T>C COSN6028070 RK217_C01 [liver][NS][carcinoma][NS]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-320e agCCAGCTTaagaca AAAGCUGG m7b (m7b->m6b) HHFCT_15989_cluster-1135_25_8
hsa-miR-3929 agcCAGCCTaagaca GAGGCUGA m6b Created HHFCT_15989_cluster-1135_25_8
hsa-miR-4419b agcCAGCCTaagaca GAGGCUGA m6b Created HHFCT_15989_cluster-1135_25_8
hsa-miR-4430 agCCAGCCTaagaca AGGCUGGA m7a (m6a->m7a) HHFCT_15989_cluster-1135_25_8
hsa-miR-4478 agcCAGCCTaagaca GAGGCUGA m6b Created HHFCT_15989_cluster-1135_25_8
hsa-miR-4505 agCCAGCCTaagaca AGGCUGGG m7a (m6a->m7a) HHFCT_15989_cluster-1135_25_8

Mutation Mutation ID Sample Name Cancer Type
chr1:g.236885187G>A COSM1662885 ccRCC-68 [kidney][NS][carcinoma][clear_cell_renal_cell_carcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-141-5p atatGAAGATattag CAUCUUCC m6b Disrupted HHKTA_19279_NM_000254|3134|3173|3.76431087150287|0.349762685112222
hsa-miR-335-3p atATGAAAAtattag UUUUUCAU m7b (m6b->m7b) HHKTA_19279_NM_000254|3134|3173|3.76431087150287|0.349762685112222
hsa-miR-889-3p atatgaaGATATTAg UUAAUAUC m7b Disrupted HHKTA_19279_NM_000254|3134|3173|3.76431087150287|0.349762685112222

Mutation Mutation ID Sample Name Cancer Type
chr1:g.236885163G>C COSM679981 TCGA-22-4607-01 [lung][NS][carcinoma][squamous_cell_carcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-1200 atacttTCAGGAaat CUCCUGAG m6b Created HHFKP_15469_cluster-1135_17_19
hsa-miR-1238-3p atactttGAGGAAat CUUCCUCG m6b Disrupted HHFKP_15469_cluster-1135_17_19
hsa-miR-3074-5p atactttCAGGAAat GUUCCUGC m6b Created HHFKP_15469_cluster-1135_17_19
hsa-miR-3140-5p atactTTCAGGaaat ACCUGAAU m6b Created HHFKP_15469_cluster-1135_17_19
hsa-miR-372-5p atacTTTGAGGaaat CCUCAAAU m7a Disrupted HHFKP_15469_cluster-1135_17_19
hsa-miR-378a-5p atacttTCAGGAaat CUCCUGAC m6b Created HHFKP_15469_cluster-1135_17_19
hsa-miR-3973 aTACTTTGaggaaat ACAAAGUA m7b Disrupted HHFKP_15469_cluster-1135_17_19
hsa-miR-4766-5p ataCTTTCAGgaaat UCUGAAAG m7b Created HHFKP_15469_cluster-1135_17_19
hsa-miR-520g-3p atACTTTGaggaaat ACAAAGUG m6b Disrupted HHFKP_15469_cluster-1135_17_19
hsa-miR-520h atACTTTGaggaaat ACAAAGUG m6b Disrupted HHFKP_15469_cluster-1135_17_19
hsa-miR-670-3p atacttTGAGGAAAt UUUCCUCA m8a Disrupted HHFKP_15469_cluster-1135_17_19
hsa-miR-8054 aTACTTTCaggaaat GAAAGUAC m7a Created HHFKP_15469_cluster-1135_17_19
hsa-miR-1200 atacttTCAGGAaat CUCCUGAG m6b Created HHKTA_19279_NM_000254|3134|3173|3.76431087150287|0.349762685112222
hsa-miR-1238-3p atactttGAGGAAat CUUCCUCG m6b Disrupted HHKTA_19279_NM_000254|3134|3173|3.76431087150287|0.349762685112222
hsa-miR-3074-5p atactttCAGGAAat GUUCCUGC m6b Created HHKTA_19279_NM_000254|3134|3173|3.76431087150287|0.349762685112222
hsa-miR-3140-5p atactTTCAGGaaat ACCUGAAU m6b Created HHKTA_19279_NM_000254|3134|3173|3.76431087150287|0.349762685112222
hsa-miR-372-5p atacTTTGAGGaaat CCUCAAAU m7a Disrupted HHKTA_19279_NM_000254|3134|3173|3.76431087150287|0.349762685112222
hsa-miR-378a-5p atacttTCAGGAaat CUCCUGAC m6b Created HHKTA_19279_NM_000254|3134|3173|3.76431087150287|0.349762685112222
hsa-miR-3973 aTACTTTGaggaaat ACAAAGUA m7b Disrupted HHKTA_19279_NM_000254|3134|3173|3.76431087150287|0.349762685112222
hsa-miR-4766-5p ataCTTTCAGgaaat UCUGAAAG m7b Created HHKTA_19279_NM_000254|3134|3173|3.76431087150287|0.349762685112222
hsa-miR-520g-3p atACTTTGaggaaat ACAAAGUG m6b Disrupted HHKTA_19279_NM_000254|3134|3173|3.76431087150287|0.349762685112222
hsa-miR-520h atACTTTGaggaaat ACAAAGUG m6b Disrupted HHKTA_19279_NM_000254|3134|3173|3.76431087150287|0.349762685112222
hsa-miR-670-3p atacttTGAGGAAAt UUUCCUCA m8a Disrupted HHKTA_19279_NM_000254|3134|3173|3.76431087150287|0.349762685112222
hsa-miR-8054 aTACTTTCaggaaat GAAAGUAC m7a Created HHKTA_19279_NM_000254|3134|3173|3.76431087150287|0.349762685112222

Mutation Mutation ID Sample Name Cancer Type
chr1:g.236880782G>A COSM1340398 TCGA-CA-6717-01 [large_intestine][colon][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-3917 tagcTCCGAGataca GCUCGGAC m6b Disrupted HHFCT_15987_cluster-1135_23_8
hsa-miR-432-5p tagCTCCAAGAtaca UCUUGGAG m8a Created HHFCT_15987_cluster-1135_23_8
hsa-miR-6874-5p tAGCTCCAagataca AUGGAGCU m7b Created HHFCT_15987_cluster-1135_23_8

Mutation Mutation ID Sample Name Cancer Type
chr1:g.236880774A>G COSM4802375 CHC1751T [liver][NS][carcinoma][hepatocellular_carcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-302b-5p aGTTAAAGTagctcc ACUUUAAC m8a (m7a->m8a) HHFCT_15987_cluster-1135_23_8
hsa-miR-302d-5p aGTTAAAGTagctcc ACUUUAAC m8a (m7a->m8a) HHFCT_15987_cluster-1135_23_8

Mutation Mutation ID Sample Name Cancer Type
chr1:g.236832038C>T COSM3485665 TCGA-ER-A19H-06 [skin][NS][malignant_melanoma][NS]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-500a-5p gcAGGATTAaggaag UAAUCCUU m7a (m6a->m7a) HHFKP_15459_cluster-1135_7_8
hsa-miR-502-5p gcaggatCAAGGAag AUCCUUGC m6b Disrupted HHFKP_15459_cluster-1135_7_8
hsa-miR-640 gcaGGATCAaggaag AUGAUCCA m6b Disrupted HHFKP_15459_cluster-1135_7_8

*By default, only target sites identified by TargetScan are displayed. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.

Genome Browser