SomamiR DB 2.0
Somatic mutations altering microRNA-ceRNA interactions
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PolymiRTS Database
Prediction criteria: TargetScan sites only     All 6mer or longer seed matches
Transcript ID: NM_001291939
Gene Symbol: MTR
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Browse Pathways

Somatic mutations that impact miRNA target sites


Mutation Mutation ID Sample Name Cancer Type
chr1:g.236900625T>G COSN5202243 SS6003303 [oesophagus][NS][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-205-3p ttctaCTGAAATata GAUUUCAG m7b Created HHHNA_2786_MTR|NM_000254|exon_utr3|-6.91920207231004|1.77922823809515
hsa-miR-222-5p ttCTACTGAaatata CUCAGUAG m7b (m6b->m7b) HHHNA_2786_MTR|NM_000254|exon_utr3|-6.91920207231004|1.77922823809515
hsa-miR-30a-3p ttctACTGAAAtata CUUUCAGU m7b Created HHHNA_2786_MTR|NM_000254|exon_utr3|-6.91920207231004|1.77922823809515
hsa-miR-30d-3p ttctACTGAAAtata CUUUCAGU m7b Created HHHNA_2786_MTR|NM_000254|exon_utr3|-6.91920207231004|1.77922823809515
hsa-miR-30e-3p ttctACTGAAAtata CUUUCAGU m7b Created HHHNA_2786_MTR|NM_000254|exon_utr3|-6.91920207231004|1.77922823809515
hsa-miR-562 ttCTACTTaaatata AAAGUAGC m6b Disrupted HHHNA_2786_MTR|NM_000254|exon_utr3|-6.91920207231004|1.77922823809515
hsa-miR-936 tTCTACTGaaatata ACAGUAGA m7b Created HHHNA_2786_MTR|NM_000254|exon_utr3|-6.91920207231004|1.77922823809515
hsa-miR-205-3p ttctaCTGAAATata GAUUUCAG m7b Created HHHSA_2786_MTR|NM_000254|exon_utr3|-6.91920207231004|1.77922823809515
hsa-miR-222-5p ttCTACTGAaatata CUCAGUAG m7b (m6b->m7b) HHHSA_2786_MTR|NM_000254|exon_utr3|-6.91920207231004|1.77922823809515
hsa-miR-30a-3p ttctACTGAAAtata CUUUCAGU m7b Created HHHSA_2786_MTR|NM_000254|exon_utr3|-6.91920207231004|1.77922823809515
hsa-miR-30d-3p ttctACTGAAAtata CUUUCAGU m7b Created HHHSA_2786_MTR|NM_000254|exon_utr3|-6.91920207231004|1.77922823809515
hsa-miR-30e-3p ttctACTGAAAtata CUUUCAGU m7b Created HHHSA_2786_MTR|NM_000254|exon_utr3|-6.91920207231004|1.77922823809515
hsa-miR-562 ttCTACTTaaatata AAAGUAGC m6b Disrupted HHHSA_2786_MTR|NM_000254|exon_utr3|-6.91920207231004|1.77922823809515
hsa-miR-936 tTCTACTGaaatata ACAGUAGA m7b Created HHHSA_2786_MTR|NM_000254|exon_utr3|-6.91920207231004|1.77922823809515
hsa-miR-205-3p ttctaCTGAAATata GAUUUCAG m7b Created HHKTA_24414_NM_000254|7195|7234|3.028755873623|0.349762685112222
hsa-miR-222-5p ttCTACTGAaatata CUCAGUAG m7b (m6b->m7b) HHKTA_24414_NM_000254|7195|7234|3.028755873623|0.349762685112222
hsa-miR-30a-3p ttctACTGAAAtata CUUUCAGU m7b Created HHKTA_24414_NM_000254|7195|7234|3.028755873623|0.349762685112222
hsa-miR-30d-3p ttctACTGAAAtata CUUUCAGU m7b Created HHKTA_24414_NM_000254|7195|7234|3.028755873623|0.349762685112222
hsa-miR-30e-3p ttctACTGAAAtata CUUUCAGU m7b Created HHKTA_24414_NM_000254|7195|7234|3.028755873623|0.349762685112222
hsa-miR-562 ttCTACTTaaatata AAAGUAGC m6b Disrupted HHKTA_24414_NM_000254|7195|7234|3.028755873623|0.349762685112222
hsa-miR-936 tTCTACTGaaatata ACAGUAGA m7b Created HHKTA_24414_NM_000254|7195|7234|3.028755873623|0.349762685112222
hsa-miR-205-3p ttctaCTGAAATata GAUUUCAG m7b Created HPKTA_3615_G3852.1_237063929
hsa-miR-222-5p ttCTACTGAaatata CUCAGUAG m7b (m6b->m7b) HPKTA_3615_G3852.1_237063929
hsa-miR-30a-3p ttctACTGAAAtata CUUUCAGU m7b Created HPKTA_3615_G3852.1_237063929
hsa-miR-30d-3p ttctACTGAAAtata CUUUCAGU m7b Created HPKTA_3615_G3852.1_237063929
hsa-miR-30e-3p ttctACTGAAAtata CUUUCAGU m7b Created HPKTA_3615_G3852.1_237063929
hsa-miR-562 ttCTACTTaaatata AAAGUAGC m6b Disrupted HPKTA_3615_G3852.1_237063929
hsa-miR-936 tTCTACTGaaatata ACAGUAGA m7b Created HPKTA_3615_G3852.1_237063929

Mutation Mutation ID Sample Name Cancer Type
chr1:g.236899990G>A COSN6028072 RK308_C01 [liver][NS][carcinoma][NS]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-4422 caccacTGCTTTaaa AAAAGCAU m6b Disrupted HHFKP_15481_cluster-1135_29_13
hsa-miR-4460 cACCACTActttaaa AUAGUGGU m7b Created HHFKP_15481_cluster-1135_29_13
hsa-miR-4519 cacCACTGCTttaaa CAGCAGUG m7b Disrupted HHFKP_15481_cluster-1135_29_13
hsa-miR-548a-5p caccacTACTTTaaa AAAAGUAA m6b Created HHFKP_15481_cluster-1135_29_13
hsa-miR-548ab caccacTACTTTaaa AAAAGUAA m6b Created HHFKP_15481_cluster-1135_29_13
hsa-miR-548ad-5p caccacTACTTTaaa AAAAGUAA m6b Created HHFKP_15481_cluster-1135_29_13
hsa-miR-548ae-5p caccacTACTTTaaa AAAAGUAA m6b Created HHFKP_15481_cluster-1135_29_13
hsa-miR-548ak caccacTACTTTaaa AAAAGUAA m6b Created HHFKP_15481_cluster-1135_29_13
hsa-miR-548am-5p caccacTACTTTaaa AAAAGUAA m6b Created HHFKP_15481_cluster-1135_29_13
hsa-miR-548ap-5p caccacTACTTTaaa AAAAGUAA m6b Created HHFKP_15481_cluster-1135_29_13
hsa-miR-548aq-5p caccacTACTTTaaa GAAAGUAA m6b Created HHFKP_15481_cluster-1135_29_13
hsa-miR-548ar-5p caccacTACTTTaaa AAAAGUAA m6b Created HHFKP_15481_cluster-1135_29_13
hsa-miR-548as-5p caccacTACTTTaaa AAAAGUAA m6b Created HHFKP_15481_cluster-1135_29_13
hsa-miR-548au-5p caccacTACTTTaaa AAAAGUAA m6b Created HHFKP_15481_cluster-1135_29_13
hsa-miR-548av-5p caccacTACTTTaaa AAAAGUAC m6b Created HHFKP_15481_cluster-1135_29_13
hsa-miR-548ay-5p caccacTACTTTaaa AAAAGUAA m6b Created HHFKP_15481_cluster-1135_29_13
hsa-miR-548b-5p caccacTACTTTaaa AAAAGUAA m6b Created HHFKP_15481_cluster-1135_29_13
hsa-miR-548bb-5p caccacTACTTTaaa AAAAGUAA m6b Created HHFKP_15481_cluster-1135_29_13
hsa-miR-548c-5p caccacTACTTTaaa AAAAGUAA m6b Created HHFKP_15481_cluster-1135_29_13
hsa-miR-548d-5p caccacTACTTTaaa AAAAGUAA m6b Created HHFKP_15481_cluster-1135_29_13
hsa-miR-548h-5p caccacTACTTTaaa AAAAGUAA m6b Created HHFKP_15481_cluster-1135_29_13
hsa-miR-548i caccacTACTTTaaa AAAAGUAA m6b Created HHFKP_15481_cluster-1135_29_13
hsa-miR-548j-5p caccacTACTTTaaa AAAAGUAA m6b Created HHFKP_15481_cluster-1135_29_13
hsa-miR-548k caccacTACTTTaaa AAAAGUAC m6b Created HHFKP_15481_cluster-1135_29_13
hsa-miR-548l caccacTACTTTaaa AAAAGUAU m6b Created HHFKP_15481_cluster-1135_29_13
hsa-miR-548o-5p caccacTACTTTaaa AAAAGUAA m6b Created HHFKP_15481_cluster-1135_29_13
hsa-miR-548w caccacTACTTTaaa AAAAGUAA m6b Created HHFKP_15481_cluster-1135_29_13
hsa-miR-548y caccacTACTTTaaa AAAAGUAA m6b Created HHFKP_15481_cluster-1135_29_13
hsa-miR-559 caccacTACTTTAaa UAAAGUAA m7a Created HHFKP_15481_cluster-1135_29_13
hsa-miR-562 caccaCTACTTTaaa AAAGUAGC m7a Created HHFKP_15481_cluster-1135_29_13
hsa-miR-6835-3p caccacTGCTTTaaa AAAAGCAC m6b Disrupted HHFKP_15481_cluster-1135_29_13
hsa-miR-8054 caccacTACTTTaaa GAAAGUAC m6b Created HHFKP_15481_cluster-1135_29_13
hsa-miR-9-3p caccactGCTTTAaa AUAAAGCU m6b Disrupted HHFKP_15481_cluster-1135_29_13

Mutation Mutation ID Sample Name Cancer Type
chr1:g.236898297C>A COSN8449612 AOCS-148-1-4 [ovary][NS][other][neoplasm]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-1273h-5p ttttcgtCCTCCCAt CUGGGAGG m7b Disrupted HHKTA_49708_NM_000254|4857|4896|1.38457411365623|0.349762685112222
hsa-miR-149-3p ttttcgtCCTCCCat AGGGAGGG m6b Disrupted HHKTA_49708_NM_000254|4857|4896|1.38457411365623|0.349762685112222
hsa-miR-30b-3p ttttcgtCCTCCCAt CUGGGAGG m7b Disrupted HHKTA_49708_NM_000254|4857|4896|1.38457411365623|0.349762685112222
hsa-miR-3689a-3p ttttcgtCCTCCCAt CUGGGAGG m7b Disrupted HHKTA_49708_NM_000254|4857|4896|1.38457411365623|0.349762685112222
hsa-miR-3689b-3p ttttcgtCCTCCCAt CUGGGAGG m7b Disrupted HHKTA_49708_NM_000254|4857|4896|1.38457411365623|0.349762685112222
hsa-miR-3689c ttttcgtCCTCCCAt CUGGGAGG m7b Disrupted HHKTA_49708_NM_000254|4857|4896|1.38457411365623|0.349762685112222
hsa-miR-6779-5p ttttcgtCCTCCCAt CUGGGAGG m7b Disrupted HHKTA_49708_NM_000254|4857|4896|1.38457411365623|0.349762685112222
hsa-miR-6780a-5p ttttcgtCCTCCCAt UUGGGAGG m7b Disrupted HHKTA_49708_NM_000254|4857|4896|1.38457411365623|0.349762685112222
hsa-miR-6799-5p ttttcgtCCTCCCat GGGGAGGU m6b Disrupted HHKTA_49708_NM_000254|4857|4896|1.38457411365623|0.349762685112222
hsa-miR-6883-5p ttttcgtCCTCCCat AGGGAGGG m6b Disrupted HHKTA_49708_NM_000254|4857|4896|1.38457411365623|0.349762685112222
hsa-miR-7106-5p ttttcgTCCTCCCAt UGGGAGGA m8a Disrupted HHKTA_49708_NM_000254|4857|4896|1.38457411365623|0.349762685112222
hsa-miR-7154-3p ttttcGTCCTCCcat AGGAGGAC m7b Disrupted HHKTA_49708_NM_000254|4857|4896|1.38457411365623|0.349762685112222

Mutation Mutation ID Sample Name Cancer Type
chr1:g.236897616G>T COSM384202 LUAD-RT-S01831 [lung][NS][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-1225-5p tggcttGTACCCAtt GUGGGUAC m7b Created HHHNE_11674_MTR|NM_000254|exon_CDS|-7.47273767031813|-0.0203548147162423
hsa-miR-1225-5p tggcttGTACCCAtt GUGGGUAC m7b Created HHHSE_11674_MTR|NM_000254|exon_CDS|-7.47273767031813|-0.0203548147162423
hsa-miR-1225-5p tggcttGTACCCAtt GUGGGUAC m7b Created HHRBC_1422_BC3-2of3-SCL_4299

Mutation Mutation ID Sample Name Cancer Type
chr1:g.236897606A>G COSM679977 TCGA-21-1071-01 [lung][NS][carcinoma][squamous_cell_carcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-513c-5p ggTTGAGAAatggct UUCUCAAG m7a (m7a->m6a) HHHNE_11674_MTR|NM_000254|exon_CDS|-7.47273767031813|-0.0203548147162423
hsa-miR-514b-5p ggTTGAGAAatggct UUCUCAAG m7a (m7a->m6a) HHHNE_11674_MTR|NM_000254|exon_CDS|-7.47273767031813|-0.0203548147162423
hsa-miR-670-3p ggtTGAGGAAtggct UUUCCUCA m7b Created HHHNE_11674_MTR|NM_000254|exon_CDS|-7.47273767031813|-0.0203548147162423
hsa-miR-513c-5p ggTTGAGAAatggct UUCUCAAG m7a (m7a->m6a) HHHSE_11674_MTR|NM_000254|exon_CDS|-7.47273767031813|-0.0203548147162423
hsa-miR-514b-5p ggTTGAGAAatggct UUCUCAAG m7a (m7a->m6a) HHHSE_11674_MTR|NM_000254|exon_CDS|-7.47273767031813|-0.0203548147162423
hsa-miR-670-3p ggtTGAGGAAtggct UUUCCUCA m7b Created HHHSE_11674_MTR|NM_000254|exon_CDS|-7.47273767031813|-0.0203548147162423
hsa-miR-513c-5p ggTTGAGAAatggct UUCUCAAG m7a (m7a->m6a) HHRBC_1422_BC3-2of3-SCL_4299
hsa-miR-514b-5p ggTTGAGAAatggct UUCUCAAG m7a (m7a->m6a) HHRBC_1422_BC3-2of3-SCL_4299
hsa-miR-670-3p ggtTGAGGAAtggct UUUCCUCA m7b Created HHRBC_1422_BC3-2of3-SCL_4299

Mutation Mutation ID Sample Name Cancer Type
chr1:g.236897605G>T COSM679979 TCGA-21-1071-01 [lung][NS][carcinoma][squamous_cell_carcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-374a-3p aggtTGATAAatggc CUUAUCAG m6b Created HHHNE_11674_MTR|NM_000254|exon_CDS|-7.47273767031813|-0.0203548147162423
hsa-miR-4729 aggttgATAAATGgc UCAUUUAU m7b Created HHHNE_11674_MTR|NM_000254|exon_CDS|-7.47273767031813|-0.0203548147162423
hsa-miR-513c-5p aggTTGAGAAatggc UUCUCAAG m7a Disrupted HHHNE_11674_MTR|NM_000254|exon_CDS|-7.47273767031813|-0.0203548147162423
hsa-miR-514b-5p aggTTGAGAAatggc UUCUCAAG m7a Disrupted HHHNE_11674_MTR|NM_000254|exon_CDS|-7.47273767031813|-0.0203548147162423
hsa-miR-374a-3p aggtTGATAAatggc CUUAUCAG m6b Created HHHSE_11674_MTR|NM_000254|exon_CDS|-7.47273767031813|-0.0203548147162423
hsa-miR-4729 aggttgATAAATGgc UCAUUUAU m7b Created HHHSE_11674_MTR|NM_000254|exon_CDS|-7.47273767031813|-0.0203548147162423
hsa-miR-513c-5p aggTTGAGAAatggc UUCUCAAG m7a Disrupted HHHSE_11674_MTR|NM_000254|exon_CDS|-7.47273767031813|-0.0203548147162423
hsa-miR-514b-5p aggTTGAGAAatggc UUCUCAAG m7a Disrupted HHHSE_11674_MTR|NM_000254|exon_CDS|-7.47273767031813|-0.0203548147162423
hsa-miR-374a-3p aggtTGATAAatggc CUUAUCAG m6b Created HHRBC_1422_BC3-2of3-SCL_4299
hsa-miR-4729 aggttgATAAATGgc UCAUUUAU m7b Created HHRBC_1422_BC3-2of3-SCL_4299
hsa-miR-513c-5p aggTTGAGAAatggc UUCUCAAG m7a Disrupted HHRBC_1422_BC3-2of3-SCL_4299
hsa-miR-514b-5p aggTTGAGAAatggc UUCUCAAG m7a Disrupted HHRBC_1422_BC3-2of3-SCL_4299

Mutation Mutation ID Sample Name Cancer Type
chr1:g.236897589C>G COSM1626915 RK148_C01 [liver][NS][carcinoma][NS]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-4789-3p aacaTATGTGTGgct CACACAUA m8a Created HHHNE_11673_MTR|NM_000254|exon_CDS|-7.55518780968825|0.144545464023992
hsa-miR-5580-3p aaCATATGTGtggct CACAUAUG m8a Created HHHNE_11673_MTR|NM_000254|exon_CDS|-7.55518780968825|0.144545464023992
hsa-miR-190a-5p aACATATCtgtggct UGAUAUGU m7b Disrupted HHHSE_11673_MTR|NM_000254|exon_CDS|-7.55518780968825|0.144545464023992
hsa-miR-190b aACATATCtgtggct UGAUAUGU m7b Disrupted HHHSE_11673_MTR|NM_000254|exon_CDS|-7.55518780968825|0.144545464023992
hsa-miR-4789-3p aacaTATGTGTGgct CACACAUA m8a Created HHHSE_11673_MTR|NM_000254|exon_CDS|-7.55518780968825|0.144545464023992
hsa-miR-5580-3p aaCATATGTGtggct CACAUAUG m8a Created HHHSE_11673_MTR|NM_000254|exon_CDS|-7.55518780968825|0.144545464023992
hsa-miR-190a-5p aACATATCtgtggct UGAUAUGU m7b Disrupted HHRBC_1422_BC3-2of3-SCL_4299
hsa-miR-190b aACATATCtgtggct UGAUAUGU m7b Disrupted HHRBC_1422_BC3-2of3-SCL_4299
hsa-miR-4789-3p aacaTATGTGTGgct CACACAUA m8a Created HHRBC_1422_BC3-2of3-SCL_4299
hsa-miR-5580-3p aaCATATGTGtggct CACAUAUG m8a Created HHRBC_1422_BC3-2of3-SCL_4299

*By default, only target sites identified by TargetScan are displayed. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.

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