SomamiR DB 2.0
Somatic mutations altering microRNA-ceRNA interactions
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PolymiRTS Database
Prediction criteria: TargetScan sites only     All 6mer or longer seed matches
Transcript ID: NM_152912
Gene Symbol: MTIF3
Browse Associations

Somatic mutations that impact miRNA target sites


Mutation Mutation ID Sample Name Cancer Type
chr13:g.27440207A>C COSM946424 TCGA-D1-A17Q-01 [endometrium][NS][carcinoma][endometrioid_carcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-2116-5p ggAAGAACaattagt GGUUCUUA m6b Created HPRO6_23069_G27017.1_28014336
hsa-miR-22-5p gGAAGAACaattagt AGUUCUUC m7b Created HPRO6_23069_G27017.1_28014336
hsa-miR-4273 ggaAGAACAattagt GUGUUCUC m6b Created HPRO6_23069_G27017.1_28014336
hsa-miR-4659a-3p gGAAGAAAaattagt UUUCUUCU m7a Disrupted HPRO6_23069_G27017.1_28014336
hsa-miR-4659b-3p gGAAGAAAaattagt UUUCUUCU m7a Disrupted HPRO6_23069_G27017.1_28014336
hsa-miR-4677-5p ggAAGAACAAttagt UUGUUCUU m8a Created HPRO6_23069_G27017.1_28014336
hsa-miR-4735-5p ggaagaaAAATTAGt CCUAAUUU m7b Disrupted HPRO6_23069_G27017.1_28014336
hsa-miR-4775 ggaagaAAAATTAgt UUAAUUUU m7b Disrupted HPRO6_23069_G27017.1_28014336
hsa-miR-6739-3p ggaAGAACAATtagt AUUGUUCU m8a Created HPRO6_23069_G27017.1_28014336

Mutation Mutation ID Sample Name Cancer Type
chr13:g.27440195G>A COSM946423 TCGA-B5-A0K3-01 [endometrium][NS][carcinoma][endometrioid_carcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-628-5p aGTCAGCAagttatt AUGCUGAC m7b Created HPRO6_23069_G27017.1_28014336
Mutation Mutation ID Sample Name Cancer Type
chr13:g.27440193G>T COSM3376466 PCSI_0085_Pa_P [pancreas][NS][carcinoma][NS]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
No TargetScan sites are altered. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.

Mutation Mutation ID Sample Name Cancer Type
chr13:g.27440187C>A COSM1677568 HCC2998 [large_intestine][colon][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
No TargetScan sites are altered. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.


Mutation Mutation ID Sample Name Cancer Type
chr13:g.27440118G>A COSM1258030 ESO-120 [oesophagus][NS][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-6870-3p tatGGATGAGCgaga GCUCAUCC m8a Disrupted HHFCT_40166_cluster-6098_2_8

Mutation Mutation ID Sample Name Cancer Type
chr13:g.27440114G>A COSM1258031 ESO-512 [oesophagus][NS][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-431-5p gatgaGCAAGACctg UGUCUUGC m7b Created HHFCT_40166_cluster-6098_2_8

Mutation Mutation ID Sample Name Cancer Type
chr13:g.27440106C>T COSM3782793 TCGA-EJ-7782-01 [prostate][NS][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-4704-3p agacctGTGACTGgt UCAGUCAC m7b Created HHFCT_40166_cluster-6098_2_8
hsa-miR-513a-5p agaCCTGTGActggt UUCACAGG m7b Created HHFCT_40166_cluster-6098_2_8

Mutation Mutation ID Sample Name Cancer Type
chr13:g.27440097C>T COSM3468030 TCGA-EE-A2MT-06 [skin][NS][malignant_melanoma][NS]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-3121-5p actggttCAAAGGAa UCCUUUGC m7a Disrupted HHFCT_40166_cluster-6098_2_8
hsa-miR-497-3p acTGGTTTaaaggaa CAAACCAC m6b Created HHFCT_40166_cluster-6098_2_8

Mutation Mutation ID Sample Name Cancer Type
chr13:g.27437237A>C COSM946419 TCGA-BS-A0UJ-01 [endometrium][NS][carcinoma][endometrioid_carcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-16-2-3p tcttcaAATATTGGa CCAAUAUU m8a Disrupted HHFKP_38792_cluster-6098_2_8
hsa-miR-195-3p tcttcaAATATTGGa CCAAUAUU m8a Disrupted HHFKP_38792_cluster-6098_2_8

Mutation Mutation ID Sample Name Cancer Type
chr13:g.27437188G>T COSM124519 HN_62897 [upper_aerodigestive_tract][larynx][carcinoma][squamous_cell_carcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-374c-5p agcagTGTATTAaga AUAAUACA m7b Created HHRBC_3622_BC3-2of3-SCL_1550
hsa-miR-5092 agcaGTGGATTaaga AAUCCACG m7a Disrupted HHRBC_3622_BC3-2of3-SCL_1550
hsa-miR-6509-3p agCAGTGGAttaaga UUCCACUG m7b (m7b->m6b) HHRBC_3622_BC3-2of3-SCL_1550
hsa-miR-655-3p agcagTGTATTAaga AUAAUACA m7b Created HHRBC_3622_BC3-2of3-SCL_1550
hsa-miR-6757-3p agCAGTGTattaaga AACACUGG m6b Created HHRBC_3622_BC3-2of3-SCL_1550
hsa-miR-1273g-3p aGCAGTGGattaaga ACCACUGC m7b Disrupted HHRBL_4203_BCBL1-2of3-SCL_3608
hsa-miR-374c-5p agcagTGTATTAaga AUAAUACA m7b Created HHRBL_4203_BCBL1-2of3-SCL_3608
hsa-miR-5092 agcaGTGGATTaaga AAUCCACG m7a Disrupted HHRBL_4203_BCBL1-2of3-SCL_3608
hsa-miR-6509-3p agCAGTGGAttaaga UUCCACUG m7b (m7b->m6b) HHRBL_4203_BCBL1-2of3-SCL_3608
hsa-miR-655-3p agcagTGTATTAaga AUAAUACA m7b Created HHRBL_4203_BCBL1-2of3-SCL_3608
hsa-miR-6757-3p agCAGTGTattaaga AACACUGG m6b Created HHRBL_4203_BCBL1-2of3-SCL_3608

Mutation Mutation ID Sample Name Cancer Type
chr13:g.27437179A>G COSM4404090 TCGA-D9-A6EC-06 [skin][NS][malignant_melanoma][NS]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-4659a-3p ttaAGAAGAAAcacc UUUCUUCU m8a Created HHRBC_3622_BC3-2of3-SCL_1550
hsa-miR-4659b-3p ttaAGAAGAAAcacc UUUCUUCU m8a Created HHRBC_3622_BC3-2of3-SCL_1550
hsa-miR-4778-3p ttAAGAAGAaacacc UCUUCUUC m7a (m6a->m7a) HHRBC_3622_BC3-2of3-SCL_1550
hsa-miR-6875-3p ttaaGAAGAAacacc AUUCUUCC m6b Created HHRBC_3622_BC3-2of3-SCL_1550
hsa-miR-4659a-3p ttaAGAAGAAAcacc UUUCUUCU m8a Created HHRBL_4203_BCBL1-2of3-SCL_3608
hsa-miR-4659b-3p ttaAGAAGAAAcacc UUUCUUCU m8a Created HHRBL_4203_BCBL1-2of3-SCL_3608
hsa-miR-4778-3p ttAAGAAGAaacacc UCUUCUUC m7a (m6a->m7a) HHRBL_4203_BCBL1-2of3-SCL_3608
hsa-miR-6875-3p ttaaGAAGAAacacc AUUCUUCC m6b Created HHRBL_4203_BCBL1-2of3-SCL_3608

Mutation Mutation ID Sample Name Cancer Type
chr13:g.27437148G>A COSM4147675 PTC-14C [thyroid][NS][other][neoplasm]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-627-3p aaAGAAAAGAaaaaa UCUUUUCU m8a Created HHRBC_3622_BC3-2of3-SCL_1550
hsa-miR-627-3p aaAGAAAAGAaaaaa UCUUUUCU m8a Created HHRBL_4203_BCBL1-2of3-SCL_3608

Mutation Mutation ID Sample Name Cancer Type
chr13:g.27435871T>A COSM1286299 NB-0121 [autonomic_ganglia][NS][neuroblastoma][NS]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-223-5p caAATACACcagact CGUGUAUU m7b (m6b->m7b) HHFCT_40165_cluster-6098_1_8
hsa-miR-4299 caaataCACCAGact GCUGGUGA m6b Created HHFCT_40165_cluster-6098_1_8
hsa-miR-4309 caaatACTCCAGact CUGGAGUC m7a Disrupted HHFCT_40165_cluster-6098_1_8
hsa-miR-4456 caaataCACCAGact CCUGGUGG m6b Created HHFCT_40165_cluster-6098_1_8
hsa-miR-496 caAATACTCcagact UGAGUAUU m7b (m7b->m6b) HHFCT_40165_cluster-6098_1_8
hsa-miR-516b-5p caaataCTCCAGAct AUCUGGAG m7b Disrupted HHFCT_40165_cluster-6098_1_8
hsa-miR-548q caaataCACCAGact GCUGGUGC m6b Created HHFCT_40165_cluster-6098_1_8
hsa-miR-7978 caaatACACCAGAct UCUGGUGU m8a Created HHFCT_40165_cluster-6098_1_8

*By default, only target sites identified by TargetScan are displayed. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.

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