SomamiR DB 2.0
Somatic mutations altering microRNA-ceRNA interactions
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PolymiRTS Database
Prediction criteria: TargetScan sites only     All 6mer or longer seed matches
Transcript ID: hsa_circ_0078291
Gene Symbol: MTHFD1L
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Somatic mutations that impact miRNA target sites


Mutation Mutation ID Sample Name Cancer Type
chr6:g.150949106G>A COSM206243 TCGA-AA-A01P-01 [large_intestine][colon][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-3940-5p cgacatCAACCCAtc GUGGGUUG m7b Created HHFKP_128638_cluster-19561_16_25
hsa-miR-4507 cgacatCAACCCAtc CUGGGUUG m7b Created HHFKP_128638_cluster-19561_16_25
hsa-miR-4507 cgacatCAACCCAtc CUGGGUUG m7b Created HPCB3_20089_G27624.1_151270235
hsa-miR-3940-5p cgacatCAACCCAtc GUGGGUUG m7b Created HPCB3_20089_G27624.1_151270235
Mutation Mutation ID Sample Name Cancer Type
chr6:g.150949105C>T COSM4471138 CSCC-27-T [skin][head_neck][carcinoma][squamous_cell_carcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
No TargetScan sites are altered. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.

Mutation Mutation ID Sample Name Cancer Type
chr6:g.150949105C>A COSM312966 S00836 [lung][NS][carcinoma][small_cell_carcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
No TargetScan sites are altered. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.


Mutation Mutation ID Sample Name Cancer Type
chr6:g.150949100G>A COSM1074545 TCGA-BS-A0UV-01 [endometrium][NS][carcinoma][endometrioid_carcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-6864-3p ccGTCTCAacatcga GUGAGACU m6b Created HHFKP_128638_cluster-19561_16_25
hsa-miR-3672 ccGTCTCAacatcga AUGAGACU m6b Created HHFKP_128638_cluster-19561_16_25
hsa-miR-3672 ccGTCTCAacatcga AUGAGACU m6b Created HPCB3_20089_G27624.1_151270235
hsa-miR-6864-3p ccGTCTCAacatcga GUGAGACU m6b Created HPCB3_20089_G27624.1_151270235

*By default, only target sites identified by TargetScan are displayed. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.

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