SomamiR DB 2.0
Somatic mutations altering microRNA-ceRNA interactions
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PolymiRTS Database

Prediction criteria: TargetScan sites only     All 6mer or longer seed matches

Transcript ID: hsa_circ_0078266
Gene Symbol: MTHFD1L
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Somatic mutations that impact miRNA target sites



Mutation Mutation ID Sample Name Cancer Type
chr6:g.150876133GA>G COSM3019150 T3064 [large_intestine][colon][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-578 attgCAAGAAaaaaac CUUCUUGU m6b Disrupted HHFKP_128626_cluster-19561_4_6
hsa-miR-578 attgCAAGAAaaaaac CUUCUUGU m6b Disrupted HHFKP_128626_cluster-19561_4_6

Mutation Mutation ID Sample Name Cancer Type
chr6:g.150876133G>A COSM1441181 TCGA-AA-3861-01 [large_intestine][caecum][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-129-5p attGCAAAAAaaaaa CUUUUUGC m7b Created HHFKP_128626_cluster-19561_4_6
hsa-miR-3680-3p atTGCAAAAaaaaaa UUUUGCAU m7a (m6a->m7a) HHFKP_128626_cluster-19561_4_6
hsa-miR-450b-5p aTTGCAAAAaaaaaa UUUUGCAA m8a (m7a->m8a) HHFKP_128626_cluster-19561_4_6
hsa-miR-507 atTGCAAAAaaaaaa UUUUGCAC m7a (m6a->m7a) HHFKP_128626_cluster-19561_4_6
hsa-miR-557 atTGCAAAaaaaaaa GUUUGCAC m6b Created HHFKP_128626_cluster-19561_4_6
hsa-miR-578 attgCAAGAAaaaaa CUUCUUGU m6b Disrupted HHFKP_128626_cluster-19561_4_6

*By default, only target sites identified by TargetScan are displayed. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.

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